Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K02
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.4  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 54  NSNLEVNHGHQQVVYHQVSGAGTYVFVRGS 143
           N N E N+ H   +YH+V     Y   R S
Sbjct: 32  NQNTEQNYTHNNEMYHRVKEEPIYESCRFS 61


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 54  NSNLEVNHGHQQVVYHQVSGAGTYVFVRGS 143
           N N E N+ H   +YH+V     Y   R S
Sbjct: 32  NQNTEQNYTHNNEMYHRVKEEPIYESCRFS 61


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 54  NSNLEVNHGHQQVVYHQVSGAGTYVFVRGS 143
           N N E N+ H   +YH V     Y   R S
Sbjct: 32  NQNTEHNYTHNNEMYHSVKEEPIYESCRFS 61


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 91   LSIIKFLELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLI 216
            L I  F+ +  TCS     + +  + A  G+++   FVG ++
Sbjct: 925  LPIAVFILVCATCSSDIQLFFAGLISAIYGLIMMAVFVGVML 966


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 91   LSIIKFLELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLI 216
            L I  F+ +  TCS     + +  + A  G+++   FVG ++
Sbjct: 925  LPIAVFILVCATCSSDIQLFFAGLISAIYGLIMMAVFVGVML 966


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -2

Query: 784 QYTFLLCSIFFCV 746
           Q+  + CS++FC+
Sbjct: 249 QFVGIFCSLYFCI 261


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 858 VTVXLLFFRICNILQICTXXKTXXFSTLFSCVR 760
           V   +    +C ++ IC   K+    T+F C +
Sbjct: 279 VQTAITLVAMCGLVLICDSAKSESQQTVFLCYK 311


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -2

Query: 784 QYTFLLCSIFFCV 746
           Q+  + CS++FC+
Sbjct: 74  QFVGIFCSLYFCI 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,749
Number of Sequences: 336
Number of extensions: 4440
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)