Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J23
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.67 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.67 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.88 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   6.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   6.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 356 GIKSTFQSRPRPYVSSGAGALNLANSSSNGVIDADSPP 243
           G+ ST  S P P +S+  G    A+++SN +     PP
Sbjct: 126 GVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPP 163


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 607 DPSTANMQSLYDKFGLXRNTQDFTGHALALYLDDNYL 717
           + +T N++ L D+FG            LA+  D NYL
Sbjct: 462 EAATLNLRKLVDQFGAEWAETTIIPKVLAMSRDQNYL 498


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 340 NVDLIPKFLMANGLLVKLLIHTGVTRYL 423
           N+D IP  ++   L+  +LIH G T+++
Sbjct: 446 NIDPIPLVVVLTHLIPFMLIHQGETQFV 473


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 331 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYL 423
           R W   +I KFL   GL+   L   G+  +L
Sbjct: 181 RKWQNKVIQKFLWTGGLVTSALFAYGLRIWL 211


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 331 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYL 423
           R W   +I KFL   GL+   L   G+  +L
Sbjct: 414 RKWQNKVIQKFLWTGGLVTSALFAYGLRIWL 444


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 331 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYL 423
           R W   +I KFL   GL+   L   G+  +L
Sbjct: 414 RKWQNKVIQKFLWTGGLVTSALFAYGLRIWL 444


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 19/83 (22%), Positives = 35/83 (42%)
 Frame = +1

Query: 361 FLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRR 540
           FL+ +   + L++ + V  Y   ++ +    YKGGK  KV     +++A        KRR
Sbjct: 489 FLVNDFGFIWLVLSSTVRAYAS-RAFKKIVTYKGGKYRKVTFQCLKSIAWRAFLAVLKRR 547

Query: 541 FRNFLIYVQDFQEEDAKTWKDFD 609
              +   +   +  +  T K  D
Sbjct: 548 TEIYKGLIDRIKSREKLTMKFHD 570


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 85  LKKCQNVG 62
           LKKCQNVG
Sbjct: 97  LKKCQNVG 104


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 85  LKKCQNVG 62
           LKKCQNVG
Sbjct: 97  LKKCQNVG 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,519
Number of Sequences: 336
Number of extensions: 3827
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)