Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J20
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 164 5e-41
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 162 2e-40
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 157 1e-38
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 156 2e-38
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 148 5e-36
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 132 4e-31
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 128 3e-30
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 82 4e-16
08_02_1528 + 27666356-27667081 29 4.9
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 6.4
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 6.4
04_04_0364 + 24726020-24726255,24726330-24726467,24727191-247276... 28 8.5
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 164 bits (399), Expect = 5e-41
Identities = 84/139 (60%), Positives = 104/139 (74%), Gaps = 4/139 (2%)
Frame = +2
Query: 314 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 487
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 488 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVXKELXEICYDVLGLLDKHLIPKASN 661
ARR+SWR+ISSIEQK E G+E + + KEYR K+ EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 662 PXSKVFYLKMKGDYYRYLA 718
P SKVFYLKMKGDYYRYLA
Sbjct: 340 PESKVFYLKMKGDYYRYLA 358
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 162 bits (394), Expect = 2e-40
Identities = 82/139 (58%), Positives = 105/139 (75%), Gaps = 4/139 (2%)
Frame = +2
Query: 314 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 487
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 488 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVXKELXEICYDVLGLLDKHLIPKASN 661
ARR+SWR+ISSIEQK E G+E + + K+YR K+ EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 662 PXSKVFYLKMKGDYYRYLA 718
P SKVFYLKMKGDYYRYLA
Sbjct: 122 PESKVFYLKMKGDYYRYLA 140
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 157 bits (380), Expect = 1e-38
Identities = 80/134 (59%), Positives = 101/134 (75%), Gaps = 4/134 (2%)
Frame = +2
Query: 329 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 502
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 503 WRVISSIEQKTEG--SERKQQMAKEYRVKVXKELXEICYDVLGLLDKHLIPKASNPXSKV 676
WR++SSIEQK EG +E + KEYR K+ EL +IC +L LLD HL+P ++ SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 677 FYLKMKGDYYRYLA 718
FYLKMKGDY+RYLA
Sbjct: 121 FYLKMKGDYHRYLA 134
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 156 bits (378), Expect = 2e-38
Identities = 82/138 (59%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
Frame = +2
Query: 317 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 490
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 491 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVXKELXEICYDVLGLLDKHLIPKASNP 664
RR+SWR+ISSIEQK E G+E KEYR ++ EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 665 XSKVFYLKMKGDYYRYLA 718
SKVFYLKMKGDY+RYLA
Sbjct: 122 ESKVFYLKMKGDYHRYLA 139
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 148 bits (358), Expect = 5e-36
Identities = 77/135 (57%), Positives = 97/135 (71%), Gaps = 7/135 (5%)
Frame = +2
Query: 335 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 499
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 500 SWRVISSIEQKTE--GSERKQQMAKEYRVKVXKELXEICYDVLGLLDKHLIPKASNPXSK 673
SWR++SSIEQK E G+ A+ YR +V EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 674 VFYLKMKGDYYRYLA 718
VFYLKMKGDY+RYLA
Sbjct: 130 VFYLKMKGDYHRYLA 144
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 132 bits (318), Expect = 4e-31
Identities = 61/129 (47%), Positives = 87/129 (67%)
Frame = +2
Query: 332 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 511
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 512 ISSIEQKTEGSERKQQMAKEYRVKVXKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKM 691
+ S+EQK ++ Y+ KV EL +C +VL ++ H +P A++ + VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 692 KGDYYRYLA 718
KGDYYRYLA
Sbjct: 123 KGDYYRYLA 131
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 128 bits (310), Expect = 3e-30
Identities = 64/100 (64%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Frame = +2
Query: 425 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVXKEL 598
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 599 XEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLA 718
IC +L LLD HL+P A SKVFYLKMKGDY+RYLA
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLA 117
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 82.2 bits (194), Expect = 4e-16
Identities = 48/111 (43%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +2
Query: 392 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 565
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 566 KEYRVKVXKELXEICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLA 718
EYR KV E+ +IC DV+ ++DK KGDYYRYLA
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLA 93
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 320 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 499
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 500 SWRVISSIEQKTE-GSERKQQMAKEYRV 580
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 299 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 469
I S+PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 329 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 490
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 491 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 583
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>04_04_0364 +
24726020-24726255,24726330-24726467,24727191-24727657,
24727753-24728300
Length = 462
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 77 TPXQRV*IIRE*YLFCKVGFSAGRICKXQQVVNVGVGSHIGIL 205
T QR+ + R +++ V FSA R C + +NV V G+L
Sbjct: 181 TIRQRISVTR--HMYYSVTFSAARTCAQAEKLNVSVTLEFGVL 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,026,809
Number of Sequences: 37544
Number of extensions: 313178
Number of successful extensions: 778
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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