Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J18
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   0.91 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   3.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +1

Query: 181  YNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRAN 345
            YNH  E ++  V+ + IGRN  +   +N+ +A      P+  +       +KRAN
Sbjct: 1710 YNHVAESILHAVHDEPIGRNYGNG--LNIGNAGHTGEIPLRPLVLDDSSILKRAN 1762


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -2

Query: 369 LCDCCQPNICTLDM--EERCAC 310
           LC CC+ + C  +M     CAC
Sbjct: 779 LCHCCEFDACDCEMTCPNNCAC 800


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 241 HYDQYHLGRLSRSTPRLYGCKRTSLRSL 158
           HY Q+H           Y C RT ++SL
Sbjct: 762 HYAQHHFNSQGSRKAEPYYCDRTLVQSL 789


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 115 ITLKPILKECEASPTMIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAF-RVNVIHA 276
           ITL+  +  C  S  ++       H   +L+S +YR   + G  AVD+  RV V+ A
Sbjct: 3   ITLQINISNCSTSQNLMLQAAKEQHADVILVSELYRHPPNNGNWAVDSSGRVAVVAA 59


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 133 LKECEASPTMIGGLFVYNHKGEV-LISRVYRDDIGRN 240
           L  CE    M+G L +   KG+V ++S  YR   G N
Sbjct: 8   LNHCEEVQDMLGQLLI-EEKGDVAMLSEPYRCPSGVN 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,649
Number of Sequences: 2352
Number of extensions: 14430
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)