Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J17
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   7.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   10.0 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   10.0 

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 349 IEKCLEKLQKRNLLNEFLS 405
           + KCL KL K   L+EFLS
Sbjct: 141 VRKCLYKLWKMPSLSEFLS 159


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 349 IEKCLEKLQKRNLLNEFLS 405
           + KCL KL K   L+EFLS
Sbjct: 141 VRKCLYKLWKMPSLSEFLS 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 259  DFVNLCQAENWPNNTTTDIELRNAFK 336
            DF NLC  E +P   T +  LR   K
Sbjct: 2169 DFKNLCGCEEYPLLRTINRVLRGYAK 2194


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 15  IYLYYCVRHFSFVICNKLGNEIEHNFL 95
           ++ YY  R F++ +CN     I H+ L
Sbjct: 143 MFQYYIGRSFTYYVCNTTIFLIFHSVL 169


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 442 KRNMIYHHNYIMLREIHLTGFFFEVFPNISLYV 344
           +RN  Y +  I+    HL+G FF VF     Y+
Sbjct: 154 QRNQEYKYYQILS---HLSGIFFTVFNVAQCYL 183


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 742 SLLIIVLKTFSNLWLWKDCTKKFD 671
           +LL ++  +F ++  WK   K FD
Sbjct: 486 NLLSVIKSSFLDINTWKMLVKSFD 509


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 797 NTIKKLFGSMKHL*ML 844
           N  K LFG+M HL +L
Sbjct: 262 NATKDLFGNMPHLQVL 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,171
Number of Sequences: 336
Number of extensions: 4528
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)