BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J17
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457189-1|CAG33470.1| 85|Homo sapiens BM-002 protein. 40 0.009
BC005193-1|AAH05193.1| 85|Homo sapiens ubiquitin-fold modifier... 40 0.009
AL356863-1|CAH70411.1| 85|Homo sapiens ubiquitin-fold modifier... 40 0.009
AB154404-1|BAD15373.1| 85|Homo sapiens Ubiquitin-fold modifier... 40 0.009
AL356863-2|CAH70412.1| 80|Homo sapiens ubiquitin-fold modifier... 38 0.038
Z70222-1|CAA94181.1| 80|Homo sapiens ORF protein. 38 0.066
BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subuni... 33 1.4
AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone recepto... 33 1.4
AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein pr... 33 1.4
AK023837-1|BAB14697.1| 1111|Homo sapiens nent TRAP240 mRNA. pro... 33 1.4
AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein. 33 1.4
AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein. 33 1.4
L05500-1|AAA02907.1| 839|Homo sapiens adenylyl cyclase protein. 30 10.0
AB209496-1|BAD92733.1| 1045|Homo sapiens brain adenylate cyclase... 30 10.0
>CR457189-1|CAG33470.1| 85|Homo sapiens BM-002 protein.
Length = 85
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +1
Query: 115 MSKVTFKITLTSDPKLPFKV 174
MSKV+FKITLTSDP+LP+KV
Sbjct: 1 MSKVSFKITLTSDPRLPYKV 20
>BC005193-1|AAH05193.1| 85|Homo sapiens ubiquitin-fold modifier 1
protein.
Length = 85
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +1
Query: 115 MSKVTFKITLTSDPKLPFKV 174
MSKV+FKITLTSDP+LP+KV
Sbjct: 1 MSKVSFKITLTSDPRLPYKV 20
>AL356863-1|CAH70411.1| 85|Homo sapiens ubiquitin-fold modifier 1
protein.
Length = 85
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +1
Query: 115 MSKVTFKITLTSDPKLPFKV 174
MSKV+FKITLTSDP+LP+KV
Sbjct: 1 MSKVSFKITLTSDPRLPYKV 20
>AB154404-1|BAD15373.1| 85|Homo sapiens Ubiquitin-fold modifier 1
protein.
Length = 85
Score = 40.3 bits (90), Expect = 0.009
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +1
Query: 115 MSKVTFKITLTSDPKLPFKV 174
MSKV+FKITLTSDP+LP+KV
Sbjct: 1 MSKVSFKITLTSDPRLPYKV 20
>AL356863-2|CAH70412.1| 80|Homo sapiens ubiquitin-fold modifier 1
protein.
Length = 80
Score = 38.3 bits (85), Expect = 0.038
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 118 SKVTFKITLTSDPKLPFKV 174
SKV+FKITLTSDP+LP+KV
Sbjct: 2 SKVSFKITLTSDPRLPYKV 20
>Z70222-1|CAA94181.1| 80|Homo sapiens ORF protein.
Length = 80
Score = 37.5 bits (83), Expect = 0.066
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 115 MSKVTFKITLTSDPKLPFKV 174
MSKV+FKITLT DP+LP+KV
Sbjct: 1 MSKVSFKITLTWDPRLPYKV 20
>BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subunit
13-like protein.
Length = 2210
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 616 LLDNLPAHIPNCFLLELKSQIFLYNLSTTKDSKMFLEQLL 735
+LDNLP H+ N F+L++ Y L T KD ++F Q L
Sbjct: 1710 MLDNLPEHMRNSFILQIVP--CQYMLQTMKDEQVFYIQYL 1747
>AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone
receptor-associated protein complex 240 kDa
component-like protein.
Length = 2210
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 616 LLDNLPAHIPNCFLLELKSQIFLYNLSTTKDSKMFLEQLL 735
+LDNLP H+ N F+L++ Y L T KD ++F Q L
Sbjct: 1710 MLDNLPEHMRNSFILQIVP--CQYMLQTMKDEQVFYIQYL 1747
>AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein
protein.
Length = 1908
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 616 LLDNLPAHIPNCFLLELKSQIFLYNLSTTKDSKMFLEQLL 735
+LDNLP H+ N F+L++ Y L T KD ++F Q L
Sbjct: 1408 MLDNLPEHMRNSFILQIVP--CQYMLQTMKDEQVFYIQYL 1445
>AK023837-1|BAB14697.1| 1111|Homo sapiens nent TRAP240 mRNA.
protein.
Length = 1111
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 616 LLDNLPAHIPNCFLLELKSQIFLYNLSTTKDSKMFLEQLL 735
+LDNLP H+ N F+L++ Y L T KD ++F Q L
Sbjct: 611 MLDNLPEHMRNSFILQIVP--CQYMLQTMKDEQVFYIQYL 648
>AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein.
Length = 2210
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 616 LLDNLPAHIPNCFLLELKSQIFLYNLSTTKDSKMFLEQLL 735
+LDNLP H+ N F+L++ Y L T KD ++F Q L
Sbjct: 1710 MLDNLPEHMRNSFILQIVP--CQYMLQTMKDEQVFYIQYL 1747
>AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein.
Length = 1917
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 616 LLDNLPAHIPNCFLLELKSQIFLYNLSTTKDSKMFLEQLL 735
+LDNLP H+ N F+L++ Y L T KD ++F Q L
Sbjct: 1417 MLDNLPEHMRNSFILQIVP--CQYMLQTMKDEQVFYIQYL 1454
>L05500-1|AAA02907.1| 839|Homo sapiens adenylyl cyclase protein.
Length = 839
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 514 QIDISLNI-YIEIFDEDKLVECLSDIMLETASKRTLLDNLPAHIPNCFLLELKSQIFLYN 690
Q+DI L + Y+ ++ E + + L+ ++R L + LPAH+ FL+ + LY
Sbjct: 524 QVDIRLRLDYLWAAQAEEEREDMEKVKLD--NRRILFNLLPAHVAQHFLMSNPRNMDLYY 581
Query: 691 LSTTKDSKMFLEQLLTNCNNSLMEI 765
S ++ MF + N N+ +E+
Sbjct: 582 QSYSQVGVMFAS--IPNFNDFYIEL 604
>AB209496-1|BAD92733.1| 1045|Homo sapiens brain adenylate cyclase 1
variant protein.
Length = 1045
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 514 QIDISLNI-YIEIFDEDKLVECLSDIMLETASKRTLLDNLPAHIPNCFLLELKSQIFLYN 690
Q+DI L + Y+ ++ E + + L+ ++R L + LPAH+ FL+ + LY
Sbjct: 791 QVDIRLRLDYLWAAQAEEEREDMEKVKLD--NRRILFNLLPAHVAQHFLMSNPRNMDLYY 848
Query: 691 LSTTKDSKMFLEQLLTNCNNSLMEI 765
S ++ MF + N N+ +E+
Sbjct: 849 QSYSQVGVMFAS--IPNFNDFYIEL 871
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,454,093
Number of Sequences: 237096
Number of extensions: 2196456
Number of successful extensions: 4531
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4531
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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