Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J17
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14429-8|AAA28214.1| 94|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF303260-1|AAG50218.1| 94|Caenorhabditis elegans 3H949 protein. 42 5e-04
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 31 0.85
Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016444-2|AAN73877.1| 320|Caenorhabditis elegans Serpentine re... 31 1.5
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.0
AF016444-13|AAB65926.1| 330|Caenorhabditis elegans Serpentine r... 30 2.0
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 30 2.6
U80029-18|AAB37597.2| 330|Caenorhabditis elegans Serpentine rec... 30 2.6
U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine rec... 30 2.6
AF016444-1|AAN73876.2| 330|Caenorhabditis elegans Serpentine re... 30 2.6
Z81571-6|CAB04616.1| 460|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF068719-4|AAC17780.1| 294|Caenorhabditis elegans Hypothetical ... 29 4.5
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL033514-29|CAA22090.1| 333|Caenorhabditis elegans Hypothetical... 28 7.9
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 28 7.9
AB070573-1|BAB63947.1| 294|Caenorhabditis elegans Ser/Thr prote... 28 7.9
>L14429-8|AAA28214.1| 94|Caenorhabditis elegans Hypothetical
protein ZK652.3 protein.
Length = 94
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 118 SKVTFKITLTSDPKLPFKV 174
SKVTFKITLTSDPKLPFKV
Sbjct: 12 SKVTFKITLTSDPKLPFKV 30
>AF303260-1|AAG50218.1| 94|Caenorhabditis elegans 3H949 protein.
Length = 94
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 118 SKVTFKITLTSDPKLPFKV 174
SKVTFKITLTSDPKLPFKV
Sbjct: 12 SKVTFKITLTSDPKLPFKV 30
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 529 LNIYIEIFDEDKLVECLSDIMLETASKRTLLDNLPAHIPN 648
L + +E+ DED + D+ LE S+ +L NLP ++P+
Sbjct: 257 LGLIVELLDEDS----IGDVKLEKISRASLRSNLPENVPD 292
>Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical
protein Y6G8.5 protein.
Length = 440
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = -3
Query: 863 LWFFRSITFINASLIQTISLSCLWLSLNKLTTKI 762
L+FF+++ +N S++QT+S+S ++ +N+ T I
Sbjct: 229 LFFFKTMPRLNVSILQTLSVSVMFFLMNRHLTLI 262
>AF016444-2|AAN73877.1| 320|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 10 protein.
Length = 320
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 430 IYHHNYIMLREIHLTGFFFEVFPNISLYVA 341
++H N I++ ++HL GFF F I L+ +
Sbjct: 43 LFHINVIIIFQVHLAGFFIHCFNRIILHAS 72
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 438 RFKKLLCRLYKSCIKKNYSFRLLYQSNRH 524
+FKK+ + +S KKNYSF LY ++H
Sbjct: 1124 QFKKIPSEVVRSIDKKNYSFDRLYDLDQH 1152
>AF016444-13|AAB65926.1| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 8 protein.
Length = 330
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 430 IYHHNYIMLREIHLTGFFFEVFPNISLY 347
++H N I++ +IHL GFF F I L+
Sbjct: 53 LFHINVIIIFQIHLFGFFIHFFSRIILH 80
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 376 KRNLLNEFLSTLYNYDDKSCY--VLKNCFADSTKAVLKK 486
KRN + F LYN +CY + K+C + T AVL K
Sbjct: 1313 KRNQIRTFDDVLYNTPLTTCYSLIAKDCSEEPTFAVLSK 1351
>U80029-18|AAB37597.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 20 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 442 KRNMIYHHNYIMLREIHLTGFFFEVFPNISLY 347
+ ++H N I++ ++HL GFF F I L+
Sbjct: 49 RNGKLFHINVIIIFQVHLFGFFVHFFSRIILH 80
>U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 22 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 430 IYHHNYIMLREIHLTGFFFEVFPNISLY 347
++H N I++ ++HL GFF F I L+
Sbjct: 53 LFHINVIIIFQVHLFGFFIHFFSRIILH 80
>AF016444-1|AAN73876.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 9 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 430 IYHHNYIMLREIHLTGFFFEVFPNISLYVALF*MHFLV 317
++H N I++ ++HL GFF I L+V +FL+
Sbjct: 53 LFHINVIIIFQVHLFGFFIHCLNRIILHVLDLYSYFLL 90
>Z81571-6|CAB04616.1| 460|Caenorhabditis elegans Hypothetical
protein M01G12.7 protein.
Length = 460
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Frame = +1
Query: 286 NWPNNTTTDIELRNAFKIAQHIEKCLEKLQK-------RNLLNEFLSTLYN--YDDKSCY 438
+WP N DIE R+ +I + + K E + + L F + + N D+ CY
Sbjct: 251 DWPTNVLYDIETRSREEILEEVAKRFEGTEDHWTIEDGQKRLQSFFNLIKNSVKKDRDCY 310
Query: 439 VLKN 450
V+ N
Sbjct: 311 VITN 314
>AF068719-4|AAC17780.1| 294|Caenorhabditis elegans Hypothetical
protein H14N18.2 protein.
Length = 294
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 508 INQIDISLNIYIEIFDEDKLVECLSDIMLETASKRT--LLDNLPAHIPNCFLLELKS 672
+++ID N Y++ D+DK C+ D++ R L +LP I C +L+S
Sbjct: 22 LHKIDPLKNFYVQFPDQDK---CIRDLLYPYIQDRNIELFGSLPLFINQCSYKQLRS 75
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical
protein F18C12.1 protein.
Length = 4171
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +1
Query: 355 KCLEKLQKRNLLN--EFLSTLYNYDDKSCYVLKNCFADSTKAVLKKIIVSDCSINQIDIS 528
+ L K+ N+ N F S L + +K Y K CF D + + I + +IN
Sbjct: 460 RSLSKMMLNNISNYSAFASKLDEFIEKLQYAEKECFDDWCRETVGLIDNKNETINLETTG 519
Query: 529 LNIYIEIFDEDKLVECLSDIMLETASKRTLLD---NLPAHIPNC 651
+Y+E + + V ++ R L+ N+P+ I +C
Sbjct: 520 KIMYLEASNRELNVNYSDRLLRLLKEVRQLISLGFNIPSKIMSC 563
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 295 NNTTTDIELRNAFKIAQHIEKCLEKLQKRNLLNEF 399
NNTT ++ NA K Q++ K L+KLQ + +F
Sbjct: 141 NNTTGKNDVINAKKRVQNLNKTLKKLQNMGINYDF 175
>AL033514-29|CAA22090.1| 333|Caenorhabditis elegans Hypothetical
protein Y75B8A.30 protein.
Length = 333
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 724 LKTFSNLWLWKDCTKKFDFLIL 659
L+ + N +WK CT+ FD+L L
Sbjct: 156 LRKYGNASVWKHCTEVFDYLSL 177
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 845 ITFINA-SLIQTISLSCLWLSLNKLTTKISIRLLLQFVNNC 726
ITF + L T +L W LN T ISI L+Q++N C
Sbjct: 1113 ITFGDGVQLTVTHNLMSSWTYLNTQKTTISIISLIQYLNKC 1153
>AB070573-1|BAB63947.1| 294|Caenorhabditis elegans Ser/Thr protein
phosphatase protein.
Length = 294
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 724 LKTFSNLWLWKDCTKKFDFLIL 659
L+ + N +WK CT+ FD+L L
Sbjct: 117 LRKYGNASVWKHCTEVFDYLSL 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,920,790
Number of Sequences: 27780
Number of extensions: 415772
Number of successful extensions: 1257
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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