Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J16
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    46   2e-07
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    31   0.010
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.36 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.84 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.1  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 46.4 bits (105), Expect = 2e-07
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 106 CEAQLTFTPGWGQGKRSEATDYRNDGCS-SEDSVYTIYKLIKNEAEKFLACQ 258
           C AQL FTP WG+     A +  ++ C  S D++  IYK+I+NEA+K + C+
Sbjct: 17  CAAQLNFTPNWGK----RAPEGESNRCKESVDTIMLIYKIIQNEAQKLVDCE 64


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 106 CEAQLTFTPGWGQGKRSEATDYRNDGCSSEDSVYTIYKLIK 228
           C AQL F+  WG+   S A    N+     +++  IYK+I+
Sbjct: 17  CTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
 Frame = +1

Query: 424 LLYRCYTDYI*FIFLIPKITFKMKTSKCII-GIITVSRELFLKISHYAFS*HLKTVY--Y 594
           L+++CY     + F    ITF +     +  G  TV    +     +     L T Y  Y
Sbjct: 46  LVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYY 105

Query: 595 STFILLCY*YFNQFSFIILYHII 663
           +  ILLC  YF     I   H++
Sbjct: 106 AFIILLCVYYFYYAFIIFTVHLL 128



 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 375 YYTITYLCTYQ*FNIAFIV*MLHRLYLIYIF 467
           Y  I  LC Y  F  AFI+  +H L+L+ I+
Sbjct: 105 YAFIILLCVYY-FYYAFIIFTVHLLFLLCIY 134



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 26/115 (22%), Positives = 43/115 (37%)
 Frame = +2

Query: 305 ICFNSFE*HC*ISYVTLSYLYKHILHNYLPMYLSIIQHCVYCIDVTQIIFDLYF*FXXXX 484
           +C   F  H       + +    +L  Y   Y  II  CVY      IIF ++  F    
Sbjct: 74  LCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCI 133

Query: 485 XXXXXPNASLE*LLSRENYF*KFHTTLFLSI*KQFIIQHLYYFVTNILINFHLLY 649
                P   L  LL    ++  F   +  ++   F++   ++F   I+   HLL+
Sbjct: 134 YYFVVP---LFFLLCIYYFYCAF---IIFTVHLLFLLCIYHFFCAFIIFTMHLLF 182


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 240 EVSSVPVLNHIEPHRRCSLNQQFVLIPLSNIVK*VT*LY 356
           +  ++P L ++EP+ R  L  +  L  L NIVK +   Y
Sbjct: 96  DYDAIPWLQNVEPNLRPKLLLKHNLFLLDNIVKPIIAFY 134


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 341 SYVTLSYLYKHILHNYLPMYLSIIQHCV-YCIDV 439
           +Y  L+ +    ++  LP+ LSI+++C+ YC ++
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 341 SYVTLSYLYKHILHNYLPMYLSIIQHCV-YCIDV 439
           +Y  L+ +    ++  LP+ LSI+++C+ YC ++
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,549
Number of Sequences: 336
Number of extensions: 3703
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)