BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J16
(734 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ388479-1|ABD43194.1| 79|Anopheles gambiae adipokinetic hormo... 42 2e-05
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 26 1.4
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 9.8
AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like pepti... 23 9.8
AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like pepti... 23 9.8
AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450 CY... 23 9.8
>DQ388479-1|ABD43194.1| 79|Anopheles gambiae adipokinetic hormone
I preproprotein protein.
Length = 79
Score = 41.9 bits (94), Expect = 2e-05
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +1
Query: 109 EAQLTFTPGWGQ------GKRSEATDYRNDGCSSE-DSVYTIYKLIKNEAEKFLAC 255
EAQLTFTP WG+ G + + D C + DS+ IY++I+ EA+K + C
Sbjct: 21 EAQLTFTPAWGKRSQGAMGINPLGSTFGQDACKTPVDSLLVIYRMIQAEAQKIVDC 76
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 25.8 bits (54), Expect = 1.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 157 PISCPGPNLE*TSAELRRPTRQRTESTQVPKRDPLSSMSSFS 32
P PGP+ + E R TR+RT + V SSM+SF+
Sbjct: 300 PAPFPGPSTD----EPRTVTRKRTTESDVESDASSSSMNSFT 337
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.0 bits (47), Expect = 9.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -1
Query: 539 NSLETVIIPMMHLEVFILNVIL 474
NS+ ++P++H+ + +L VI+
Sbjct: 237 NSILRAMVPLLHIALLVLFVII 258
>AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 347 VTLSYLYKHILHNYLPMYLSIIQHCVY 427
VTL +L H HN+ + ++ C Y
Sbjct: 113 VTLQHLNTHEEHNFHRVRRQVVAECCY 139
>AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 347 VTLSYLYKHILHNYLPMYLSIIQHCVY 427
VTL +L H HN+ + ++ C Y
Sbjct: 113 VTLQHLNTHEEHNFHRVRRQVVAECCY 139
>AY062208-1|AAL58569.1| 503|Anopheles gambiae cytochrome P450
CYP6M1 protein.
Length = 503
Score = 23.0 bits (47), Expect = 9.8
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +2
Query: 602 LYYFVTNILINFHLLYYTT*YVKTIQNYRPLLTYYNVDH 718
+Y T +++ L +VK Q + TYYN H
Sbjct: 76 VYMLTTPVVLPLDLELIKAIFVKDFQYFHDRGTYYNEKH 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,890
Number of Sequences: 2352
Number of extensions: 13531
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -