Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J13
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.29 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.6  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = -1

Query: 706 VLY*L*AFHFVTTIFYGVALGYFNCAVFTSVTHYDYFIFV*RVFFLSVLQELN----CFI 539
           +L+ L  ++FV  +F+ + + YF CA      H  + + +   F   ++  ++    C  
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAF 186

Query: 538 QHGWQSFFFIICRNNYT 488
                   F++C + +T
Sbjct: 187 IFFNMHLLFLLCLDYFT 203


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -1

Query: 682 HFVTT--IFYGVALGYFN-CAVFTSVTHYDYFIFV*RVFFLSVLQELNCF 542
           HF+    I +GV     N C V  S+  +  F+FV   F + + Q   C+
Sbjct: 206 HFLALLDIVHGVHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFYYCY 255


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 310 FIWYCYSVGSINCARYNTIYNN 375
           FI +   +G++ C +Y T Y+N
Sbjct: 4   FIAFLMLLGAVWCEQYTTKYDN 25


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 541 IQHGWQSFFFIICRN 497
           +  GWQ+  F++C N
Sbjct: 303 VGEGWQNTDFVVCFN 317


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 560 ENRQKENPSYKYEIIIV 610
           E + KE P Y Y  +I+
Sbjct: 77  EKKSKEKPPYSYNALIM 93


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 717 PFPLFFINSRHFTLSL 670
           P+P  +INS  F+LSL
Sbjct: 37  PYPQNYINSYLFSLSL 52


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 685 FHFVTTIFY-GVALGYFNCAVFTSVTHYDYFIFV*RVFFLSVL 560
           F+F T +F        F C     + HY  FIFV  VFF  ++
Sbjct: 69  FNFWTILFSRSDFFQQFECDNEPKLRHYLIFIFV-NVFFWVII 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,408
Number of Sequences: 336
Number of extensions: 2817
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)