Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J13
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0489 - 34284301-34284336,34285104-34285227,34285307-342853...    92   5e-19
03_06_0508 + 34417540-34417649,34418239-34418338,34418445-344184...    36   0.027
10_07_0046 - 12338705-12339187                                         31   1.3  
02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,522...    29   4.1  
02_02_0449 - 10377835-10377876,10377977-10378117,10378230-103783...    28   9.5  

>03_06_0489 -
           34284301-34284336,34285104-34285227,34285307-34285371,
           34285472-34285555,34285661-34285789,34285887-34285976,
           34286116-34286250,34286939-34286984,34287119-34287225,
           34287355-34287412,34287524-34287765
          Length = 371

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 50/116 (43%), Positives = 65/116 (56%)
 Frame = +2

Query: 419 YNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIEFLENRQKENPSYKYE 598
           + D  +  K+R PSI            PAYNEE RLP  L ET+ +L+ R     S+ YE
Sbjct: 92  FEDPNSLNKVRCPSIYDPAEKYISLIIPAYNEEHRLPEALTETLNYLKQRSAVEKSFTYE 151

Query: 599 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKGGAVRLGIQSSRGATIL 766
           ++IV DGS D T KVA  +  K+  D V+ L L +N GKG AVR G+  SRG  +L
Sbjct: 152 VLIVDDGSTDHTSKVAFEFVRKHKIDNVRVLLLGRNHGKGEAVRKGMLHSRGELLL 207


>03_06_0508 +
           34417540-34417649,34418239-34418338,34418445-34418478,
           34418559-34418635,34418929-34419005,34419060-34419224,
           34419306-34419420,34419546-34419650
          Length = 260

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +2

Query: 572 KENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKGGAVRLGIQSSR 751
           K  P   +EII+V DGS D T  + +     YG ++V      +  G G A   G++ + 
Sbjct: 34  KHLPDVNFEIIVVDDGSPDGTQDIVKQLQQIYGENRVLLRARPRKLGLGTAYLHGLKHAS 93

Query: 752 G 754
           G
Sbjct: 94  G 94


>10_07_0046 - 12338705-12339187
          Length = 160

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = +2

Query: 515 EKRLPPMLDETIEFL-ENRQKENPSYKYEIIIVSDGSKDSTVKVA-ESYSIKYGSDKVKC 688
           +K+LPP+ D+    L   +  E P+    I +V  G KD+ +K+A E YS K  SD   C
Sbjct: 77  KKQLPPLADKGSSVLCYTKDTELPA----ITLVFAG-KDAAMKLAPEHYSYKR-SDGAVC 130

Query: 689 LELIKNRGKGGAVRLG 736
           L ++++   GG   +G
Sbjct: 131 LSILRSPLHGGVFVIG 146


>02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,
            5222445-5222793,5223189-5223510,5223621-5224123,
            5224486-5224578,5224708-5224759,5224837-5225129,
            5225208-5225630,5225734-5226070,5226185-5226220,
            5226272-5226589,5227465-5228450
          Length = 1637

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 377  DTYPVVERYKDEETYND 427
            ++YP VERY D + YND
Sbjct: 1409 ESYPEVERYSDNDIYND 1425


>02_02_0449 -
           10377835-10377876,10377977-10378117,10378230-10378337,
           10378418-10378465,10378568-10378780,10378905-10378969,
           10379092-10379216,10379332-10379524,10379621-10379723
          Length = 345

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
 Frame = +2

Query: 536 LDETIEFLEN-------RQKENPSYKYEIIIVSDGSKDSTVKVAESYS 658
           LD  I F E        R+++NP YKY + ++  G +D    +  +Y+
Sbjct: 224 LDRAISFYEKACGMELLRKRDNPEYKYTVAMMGYGPEDKNAVLELTYN 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,066,164
Number of Sequences: 37544
Number of extensions: 263239
Number of successful extensions: 504
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)