Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J13
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    25   3.4  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   6.0  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.9  

>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 600 ISYLYEGFSFCRFSKNSI 547
           ++YL +GFSF  + K SI
Sbjct: 457 LAYLLQGFSFAPYEKTSI 474


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 708 EEKEEQSDWAYKVREVQRYC 767
           EE+E  SDW +    V R+C
Sbjct: 446 EEQELISDWKFAAMVVDRFC 465


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 708 EEKEEQSDWAYKVREVQRYC 767
           EE+E  SDW +    V R+C
Sbjct: 446 EEQELISDWKFAAMVVDRFC 465


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 560 PRTQLFHPTWVAVFFLHYMQEQL 492
           PRT    P W+   FLHY+   L
Sbjct: 324 PRTHRM-PMWIRSVFLHYLPAML 345


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 59  KFIAHPHXPSXIKSLH 106
           KF+ H H P  I++ H
Sbjct: 268 KFVCHQHEPQEIRTCH 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,253
Number of Sequences: 2352
Number of extensions: 12032
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)