BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J13
(772 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094692-1|AAM11045.1| 326|Drosophila melanogaster GH09240p pro... 144 9e-35
AE014134-1452|AAF52633.1| 326|Drosophila melanogaster CG7870-PA... 144 9e-35
AE014134-3120|AAF53817.1| 241|Drosophila melanogaster CG10166-P... 46 4e-05
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P... 29 7.1
>AY094692-1|AAM11045.1| 326|Drosophila melanogaster GH09240p
protein.
Length = 326
Score = 144 bits (350), Expect = 9e-35
Identities = 69/133 (51%), Positives = 93/133 (69%)
Frame = +2
Query: 374 TDTYPVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIE 553
T YP ++R+KDEET+ D T + FPS+ PAYNEE+RLP MLDE +
Sbjct: 31 TKPYPNIKRHKDEETFLDPHTIKTVTFPSLEDSPSLELSVIVPAYNEEQRLPSMLDECLA 90
Query: 554 FLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKGGAVRL 733
FLE + P++ YE+I+VSDGS+D+TV VA YS K+G++KV+ LELI+NRGKGGAVR+
Sbjct: 91 FLEQKSAGTPNFTYEVIVVSDGSQDATVSVALGYSKKHGAEKVRVLELIENRGKGGAVRM 150
Query: 734 GIQSSRGATILXA 772
G+ S+RG +L A
Sbjct: 151 GMLSARGRNLLFA 163
>AE014134-1452|AAF52633.1| 326|Drosophila melanogaster CG7870-PA
protein.
Length = 326
Score = 144 bits (350), Expect = 9e-35
Identities = 69/133 (51%), Positives = 93/133 (69%)
Frame = +2
Query: 374 TDTYPVVERYKDEETYNDYLTNTKLRFPSIXXXXXXXXXXXXPAYNEEKRLPPMLDETIE 553
T YP ++R+KDEET+ D T + FPS+ PAYNEE+RLP MLDE +
Sbjct: 31 TKPYPNIKRHKDEETFLDPHTIKTVTFPSLEDSPSLELSVIVPAYNEEQRLPSMLDECLA 90
Query: 554 FLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKGGAVRL 733
FLE + P++ YE+I+VSDGS+D+TV VA YS K+G++KV+ LELI+NRGKGGAVR+
Sbjct: 91 FLEQKSAGTPNFTYEVIVVSDGSQDATVSVALGYSKKHGAEKVRVLELIENRGKGGAVRM 150
Query: 734 GIQSSRGATILXA 772
G+ S+RG +L A
Sbjct: 151 GMLSARGRNLLFA 163
>AE014134-3120|AAF53817.1| 241|Drosophila melanogaster CG10166-PA
protein.
Length = 241
Score = 46.4 bits (105), Expect = 4e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +2
Query: 500 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 679
P YNE+ LP ++ +++++ E YE+I++ DGS D T+ VA+ YG DK
Sbjct: 13 PTYNEKDNLPIIIWLIVKYMKASGLE-----YEVIVIDDGSPDGTLDVAKDLQKIYGEDK 67
Query: 680 VKCLELIKNRGKGGAVRLGIQSSRGATIL 766
+ G G A GI+ + G I+
Sbjct: 68 IVLRPRGSKLGLGTAYIHGIKHATGDFIV 96
>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
protein.
Length = 1377
Score = 29.1 bits (62), Expect = 7.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 524 LPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKD 628
LPP L F++ ++ P K E+ IVSD D
Sbjct: 1090 LPPPLVPQTPFIDRLNQKEPEIKIEVKIVSDSKSD 1124
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,576,782
Number of Sequences: 53049
Number of extensions: 467670
Number of successful extensions: 990
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -