Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J13
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 2.8
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 2.8
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 2.8
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 29 3.7
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 29 3.7
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 29 3.7
Z74038-5|CAA98494.1| 137|Caenorhabditis elegans Hypothetical pr... 29 4.8
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 8.5
>AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical
protein H43I07.3 protein.
Length = 339
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/91 (39%), Positives = 55/91 (60%)
Frame = +2
Query: 500 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 679
PA NE +R+ MLD+ ++LE R +++ + YEII+V DGS D T + +
Sbjct: 88 PAMNEVERIEIMLDDCCDYLEARAEKDKDFTYEIIVVDDGSTDETADIVVQIGAR--RQN 145
Query: 680 VKCLELIKNRGKGGAVRLGIQSSRGATILXA 772
++ L++ NRGKGGAV++G+ S G IL A
Sbjct: 146 LRVLKMKANRGKGGAVKMGVLHSSGKLILFA 176
>AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical
protein Y66H1A.2 protein.
Length = 239
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/89 (34%), Positives = 44/89 (49%)
Frame = +2
Query: 500 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 679
P YNE++ LP I +EN KE +E+IIV D S D T +A+ +YG DK
Sbjct: 12 PTYNEKENLPIC----IWLIENYLKE---VSHEVIIVDDASPDGTQGIAKLLQKEYGDDK 64
Query: 680 VKCLELIKNRGKGGAVRLGIQSSRGATIL 766
+ + G G A G+ +RG I+
Sbjct: 65 ILIKPRVGKLGLGTAYSHGLSFARGEFII 93
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 507 IMKKKDCHPCWMKQLSSWRTDKKKTLHTNM 596
I+KKK+ M+ +++W +K K +H NM
Sbjct: 4 IVKKKEAMKKQMEDMAAWELEKIKRIHANM 33
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 507 IMKKKDCHPCWMKQLSSWRTDKKKTLHTNM 596
I+KKK+ M+ +++W +K K +H NM
Sbjct: 27 IVKKKEAMKKQMEDMAAWELEKIKRIHANM 56
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 507 IMKKKDCHPCWMKQLSSWRTDKKKTLHTNM 596
I+KKK+ M+ +++W +K K +H NM
Sbjct: 277 IVKKKEAMKKQMEDMAAWELEKIKRIHANM 306
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 643
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 643
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 643
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>Z74038-5|CAA98494.1| 137|Caenorhabditis elegans Hypothetical
protein F58B4.4 protein.
Length = 137
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 527 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKN 706
PP+++ T+E + NR + + IV D D + K +I+Y SD +K +I +
Sbjct: 35 PPIVNITVELVSNRSFDPEKNASNLKIVKDAVDDYSKK----ENIRYPSDNIK-QSIIDH 89
Query: 707 RGK 715
GK
Sbjct: 90 GGK 92
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 601 NHSE*RK*RQHS*SSRELLHKIW**QSEMPRVNKEQRKRRSSQT 732
+HS+ RK R SRE H+ + E R K++R+RRSS T
Sbjct: 428 HHSKSRKHRSKRSESREERHRR---RKEKKREKKKKRRRRSSTT 468
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,539,643
Number of Sequences: 27780
Number of extensions: 258337
Number of successful extensions: 610
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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