Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_J02
(539 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 90 2e-18
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 90 2e-18
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 90 2e-18
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 90 2e-18
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 90 2e-18
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 32 0.44
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 32 0.44
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 32 0.44
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 32 0.44
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 30 2.3
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 30 2.3
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 30 2.3
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 5.4
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 90 AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
AVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMPVGG
Sbjct: 10 AVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGG 69
Query: 270 G 272
G
Sbjct: 70 G 70
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 90 AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
AVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMPVGG
Sbjct: 10 AVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGG 69
Query: 270 G 272
G
Sbjct: 70 G 70
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 90 AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
AVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMPVGG
Sbjct: 10 AVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGG 69
Query: 270 G 272
G
Sbjct: 70 G 70
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 90 AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
AVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMPVGG
Sbjct: 10 AVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGG 69
Query: 270 G 272
G
Sbjct: 70 G 70
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/61 (70%), Positives = 49/61 (80%)
Frame = +3
Query: 90 AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
AVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMPVGG
Sbjct: 10 AVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGG 69
Query: 270 G 272
G
Sbjct: 70 G 70
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 212 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSRVNTRPRNA 63
I VEL D F K V D G++ + N+ S RGLA NT R A
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 212 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSRVNTRPRNA 63
I VEL D F K V D G++ + N+ S RGLA NT R A
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 212 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSRVNTRPRNA 63
I VEL D F K V D G++ + N+ S RGLA NT R A
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = -1
Query: 212 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLATQHSRVNTRPRNA 63
I VEL D F K V D G++ + N+ S RGLA NT R A
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 271 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 116
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 271 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 116
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 271 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 116
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 129 VEKILSSVGIEADGEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 269
V KIL G++ + +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,877,731
Number of Sequences: 53049
Number of extensions: 259857
Number of successful extensions: 961
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -