Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_J02
         (539 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    59   2e-09
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    31   0.40 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    31   0.40 
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    31   0.40 
AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical...    29   2.1  
AC024882-7|AAF60924.1|  285|Caenorhabditis elegans Hypothetical ...    28   3.7  
AL032644-4|CAA21665.1|  490|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +3

Query: 90  AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
           A LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ KLSS+P GG
Sbjct: 10  ATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSGG 69


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 38/103 (36%), Positives = 46/103 (44%)
 Frame = +3

Query: 90  AVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGG 269
           AVLGG   P   D++ ILS+VG++AD E  K V++ L GK VE+LIA G   L S  V G
Sbjct: 10  AVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVS--VSG 67

Query: 270 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 398
           G                                   MGFGLFD
Sbjct: 68  GAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 227
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 227
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 271 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 101
           P P       SRP+AI  +TS   S +    +  PS S P+ L +F+ +   GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395


>AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical
           protein T15B7.2 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +3

Query: 24  SALHVSCQLGLKKCVTWPRIYSAV-LGGKTTPAAADVEKILSSVGI 158
           SA+ V   LGL   +TWP++Y +V    K    AA +E I + VG+
Sbjct: 19  SAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGL 64


>AC024882-7|AAF60924.1|  285|Caenorhabditis elegans Hypothetical
           protein Y9C9A.12 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 25  RHYTFRVN*DLKNALRGRVFTRL 93
           +H+T R++ D+KN  R + FTR+
Sbjct: 98  KHFTIRISDDIKNKNRDQCFTRI 120


>AL032644-4|CAA21665.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51H1A.4 protein.
          Length = 490

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 132 EKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 272
           EK      +EAD   + ++I +   + VE L+ A +E+     VGGG
Sbjct: 101 EKTTFQCEMEADNSGVTEMIEKRYTQHVESLLTARKERKRRHRVGGG 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,433,253
Number of Sequences: 27780
Number of extensions: 127339
Number of successful extensions: 423
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)