Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I24
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 228 4e-61
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 107 2e-24
SPCC1682.10 |rpn8||19S proteasome regulatory subunit Rpn8|Schizo... 44 1e-05
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 44 2e-05
SPBC4C3.07 |||translation initiation factor eIF3f|Schizosaccharo... 33 0.045
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 1.7
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.3
SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyc... 26 5.2
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 26 5.2
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 6.9
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 25 6.9
SPAC1071.12c |stp1|SPAC926.01c|low molecular weight phosphotyros... 25 9.1
SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1 |Schizosa... 25 9.1
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 9.1
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 228 bits (558), Expect = 4e-61
Identities = 106/120 (88%), Positives = 112/120 (93%)
Frame = +2
Query: 272 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 451
E VYISSLALLKML+HGR G PMEVMGLMLGEFVDD+TVRV+DVFAMPQ+GTGVSVEAVD
Sbjct: 28 ECVYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVD 87
Query: 452 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAVVVDPI 631
PVFQ M+DMLKQTGRPEMVVGWYHSHPGFGCWLS VDINTQQSFE L+ RAVAVVVDPI
Sbjct: 88 PVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPI 147
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 107 bits (256), Expect = 2e-24
Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = +2
Query: 278 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDPV 457
V IS++ALLKML+H G+P+EVMG + G+ V+ ++ ++D FA+P GT V A +
Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEA 93
Query: 458 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAVVVDP 628
+ + + K R E V+GWYHSHP +GCWLSGVD+ TQ+ + VAVV+DP
Sbjct: 94 QEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDP 152
>SPCC1682.10 |rpn8||19S proteasome regulatory subunit
Rpn8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 44.4 bits (100), Expect = 1e-05
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +2
Query: 272 EQVYISSLALLKML-KHGRA--GVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QTGTGVS 436
+QV + L LL + + R+ G V+G++LG+ D V V + +A+P + S
Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGD-VVNVANSYAIPFEEDEKNAS 73
Query: 437 VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHP 535
V +D F M +M K+ E +VGWYH+ P
Sbjct: 74 VWFLDHNFMESMNEMFKKINANEKLVGWYHTGP 106
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 43.6 bits (98), Expect = 2e-05
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +2
Query: 506 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAVVVDP 628
+ +GW H+HP C++S VD++T S++ + A+A+V+ P
Sbjct: 335 LTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLPEAIAIVMAP 375
>SPBC4C3.07 |||translation initiation factor
eIF3f|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 32.7 bits (71), Expect = 0.045
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +2
Query: 278 VYISSLALLKMLKHG--RAGVPMEVMGLMLGEFVDD-YTVRVIDVFAMPQTGTGVSVEAV 448
+ I L +L H ++ V+G +LG +D + + FA+P + VE V
Sbjct: 23 IVIEPAVLFSILDHSTRKSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSEQVE-V 81
Query: 449 DPVFQAKMLDMLKQTGRPEMVVGWYHSHP 535
+ + M + + E+VVGWY + P
Sbjct: 82 EMEYHRAMYHLHLKANPREVVVGWYATSP 110
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 447 TASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGT 331
+AST T VP NTSIT S ++S S S T
Sbjct: 135 SASTSTAVPTTEARNTSITEPANSPSSSSSSASTKSTAT 173
>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 359 LGEFVDDYTVRVIDVFAMPQTGTGVSVEAVDP 454
+G++ DD+ V VF +P+T + ++DP
Sbjct: 142 MGDWQDDFQDAVNSVFGLPETPKTIEESSLDP 173
>SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 523 IPSNNHFGSSCLFQHVQHLSLEDWINSLYRYSSPGL 416
IPS N FG CL + + + + + N+L + PG+
Sbjct: 51 IPSFNLFGKGCLAEAAKQIKMSGFKNTLI-VTDPGI 85
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 473 LDMLKQTGRPEMVVGWY-HSHP 535
+D++ Q GRP+++ GW H+ P
Sbjct: 831 VDVVGQAGRPKVITGWVTHTTP 852
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 459 KTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITS 340
+T ST ST + V G ++ SIT T SST S + ++S
Sbjct: 585 ETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLSS 624
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 483 NMSNILAWKTGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPA 325
N + +L T + ST P P + T T T ++ P T GTP+
Sbjct: 171 NPATVLIVTTSGSTSTSCPPPTTILIVTVPTTTTTTTVGYPGSVTTTLTGTPS 223
>SPAC1071.12c |stp1|SPAC926.01c|low molecular weight phosphotyrosine
protein phosphatase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 156
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 421 GLWHSKYINNSNCIVIYKLSEHETHNLHRNASTSMFQHFKEC*GRDVHLLRGVH 260
G WH + + + K + T +L R STS F++F D LR ++
Sbjct: 47 GAWHVGNRPDPRTLEVLKKNGIHTKHLARKLSTSDFKNFDYIFAMDSSNLRNIN 100
>SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 652
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 390 ELLMYLLCHKPGLEYL*RLLIQSSKLRCWTC*NKQDDPKWL 512
+LL LLC P R+ + KL WT +D KWL
Sbjct: 384 DLLKRLLCKDPEQ----RITLVEVKLHPWTLDGLKDPEKWL 420
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 496 SCLFQHVQHLSLEDWINSLYRYSSPGLWHSKY 401
+C + + +L+D+INSL Y P +W +++
Sbjct: 429 ACHWYGIDFSNLQDYINSLANYGLP-IWLTEF 459
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,470,589
Number of Sequences: 5004
Number of extensions: 49489
Number of successful extensions: 159
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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