Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I24
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome re... 245 2e-65
U00032-7|AAA50633.1| 319|Caenorhabditis elegans Hypothetical pr... 203 9e-53
U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signaloso... 113 1e-25
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 40 0.001
AF022974-2|AAC48038.1| 344|Caenorhabditis elegans Seven tm rece... 31 0.91
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 29 2.8
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 29 2.8
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 3.7
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 28 6.4
U80838-4|AAT48616.1| 648|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical... 28 6.4
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 28 6.4
AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm rece... 28 6.4
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 8.4
>AF077534-8|AAC26287.1| 312|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 11 protein.
Length = 312
Score = 245 bits (599), Expect = 2e-65
Identities = 116/120 (96%), Positives = 117/120 (97%)
Frame = +2
Query: 272 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 451
E VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTV VIDVFAMPQ+GTGVSVEAVD
Sbjct: 31 ETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVD 90
Query: 452 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAVVVDPI 631
PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS RAVAVVVDPI
Sbjct: 91 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPI 150
>U00032-7|AAA50633.1| 319|Caenorhabditis elegans Hypothetical
protein F37A4.5 protein.
Length = 319
Score = 203 bits (495), Expect = 9e-53
Identities = 92/120 (76%), Positives = 105/120 (87%)
Frame = +2
Query: 272 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 451
E V ISSLALLKML+H R+G+P+EVMGLMLG+FVDDYT+ V DVFAMPQ+GT V+VE+VD
Sbjct: 27 ETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVD 86
Query: 452 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAVVVDPI 631
PV+Q K +D+LK GR E VVGWYHSHPGFGCWLS VD+NTQQSFEAL RAVAVVVDPI
Sbjct: 87 PVYQTKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPI 146
>U80814-5|AAB37991.1| 368|Caenorhabditis elegans Cop-9 signalosome
subunit protein 5 protein.
Length = 368
Score = 113 bits (271), Expect = 1e-25
Identities = 53/122 (43%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Frame = +2
Query: 272 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQTGTGVSVEAVD 451
+Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V A
Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112
Query: 452 PVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAVVVD 625
++ + +M GR E VVGWYHSHPG+GCWLSG+D++TQ + VA+V+D
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172
Query: 626 PI 631
P+
Sbjct: 173 PL 174
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Frame = +2
Query: 275 QVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMP--QTGTGVS 436
+V + L LL ++ H + V+G++LG D T+ + + FA+P + S
Sbjct: 40 KVTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKS 99
Query: 437 VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSXRAVAV 616
+D + M M + E +VGWYH+ P L DI + + V V
Sbjct: 100 TWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPK----LHKNDIAINEQLKRFCPNPVLV 155
Query: 617 VVD 625
++D
Sbjct: 156 IID 158
>AF022974-2|AAC48038.1| 344|Caenorhabditis elegans Seven tm
receptor protein 209 protein.
Length = 344
Score = 30.7 bits (66), Expect = 0.91
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 552 YLVWTSTLNSHLKHYXNVQLLLWLIPS 632
Y W + N HLK + +++ LW +PS
Sbjct: 113 YRYWAVSGNKHLKEFEGLRIFLWTLPS 139
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 508 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 329
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 1345 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 1403
Query: 328 STS 320
S
Sbjct: 1404 DQS 1406
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 508 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 329
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 126 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 184
Query: 328 STS 320
S
Sbjct: 185 DQS 187
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 508 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 329
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 1345 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 1403
Query: 328 STS 320
S
Sbjct: 1404 DQS 1406
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 508 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 329
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 126 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 184
Query: 328 STS 320
S
Sbjct: 185 DQS 187
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 508 HFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRNA 329
++ + L QH +HL L+ I LY+Y L S+YI IV+ K +++ H A
Sbjct: 1348 NYSLALLTQHTRHLWLQSLILILYKYRFDQLPVSEYIVRLIGIVV-KTLQNQVHECSDAA 1406
Query: 328 STS 320
S
Sbjct: 1407 DQS 1409
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 444 ASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARPC 316
A +DT +PVC +AN + T SS + I G + C
Sbjct: 1746 AESDTCLPVCSVANVCSSGTCVSSNTTAGYECICPAGKTGKNC 1788
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 444 ASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARPC 316
A +DT +PVC +AN + T SS + I G + C
Sbjct: 1746 AESDTCLPVCSVANVCSSGTCVSSNTTAGYECICPAGKTGKNC 1788
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical
protein R10E8.6 protein.
Length = 1696
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 523 IPSNNHFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSE 359
IPSN+ C +H + D+I S+ Y PG + I+ + + +L +
Sbjct: 480 IPSNSLKADGCCISFNRHPLITDYITSVLSYFQPGTLENIAIHTAPHTIAMELED 534
>U80838-4|AAT48616.1| 648|Caenorhabditis elegans Hypothetical
protein F47F6.5 protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 457 DWINSLYRYSSPGLWHSKYINN 392
DWI+ +YR+ P YINN
Sbjct: 447 DWIDEVYRFERPSRVFCHYINN 468
>AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical
protein H04M03.12 protein.
Length = 260
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = -3
Query: 511 NHFGSSCLFQHVQHLSLEDWINSLYRYSSPGLWHSKYINNSNCIVIYKLSEHETHNLHRN 332
NH + + V+ L S+YRYS P + + I KL +H+TH
Sbjct: 86 NHLKNDSRVRRVKWRHLSSERVSIYRYSLPAITYEMSFIKFIIQEISKL-QHQTHFFLYK 144
Query: 331 ASTSMFQHFKEC 296
+ +H K C
Sbjct: 145 QNLLFLKHAKNC 156
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 456 TGSTASTDTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGT 331
+ +TAST TP P+ T+ T T ++T P+ T I T
Sbjct: 79 SSTTASTVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHIPT 120
>AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm
receptor protein 256 protein.
Length = 353
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 525 IHILALVVGYLVWTSTLNSHLKHYXNVQLLLW-LIPS 632
I ILAL Y ++ T N HLK + + +++LW +IP+
Sbjct: 101 IAILALHFIYRFFSITNNPHLKSFDSWKIVLWFMIPA 137
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -1
Query: 462 WKTGSTAST--DTPVPVCGIANTSITRTV*SSTNSPSMRPITSIGTPARP 319
W T T ST TP I +T T T ST + P T TP P
Sbjct: 149 WATKPTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,732,917
Number of Sequences: 27780
Number of extensions: 277814
Number of successful extensions: 734
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -