Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I23
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007559-1|AAH07559.1| 218|Homo sapiens eukaryotic translation ... 230 3e-60
BC001031-1|AAH01031.1| 218|Homo sapiens eukaryotic translation ... 230 3e-60
AY245432-1|AAP22070.1| 218|Homo sapiens eukaryotic translation ... 230 3e-60
AF315506-1|AAK01365.1| 218|Homo sapiens ARG134 protein protein. 230 3e-60
AF109355-1|AAQ13503.1| 218|Homo sapiens MSTP001 protein. 230 3e-60
AB019392-1|BAA76626.1| 218|Homo sapiens M9 protein. 230 3e-60
BC007335-1|AAH07335.2| 117|Homo sapiens EIF3S12 protein protein. 102 1e-21
AY271826-1|AAQ01753.1| 417|Homo sapiens ZYG-11A early embryogen... 35 0.32
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 32 2.3
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 32 2.3
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 32 2.3
BC005407-1|AAH05407.1| 853|Homo sapiens NUP188 protein protein. 32 2.3
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 32 2.3
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 32 2.3
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein. 31 5.2
Z48541-1|CAA88425.1| 1216|Homo sapiens protein tyrosine phosphat... 30 9.1
U20489-1|AAA82892.1| 1188|Homo sapiens glomerular epithelial pro... 30 9.1
BT009772-1|AAP88774.1| 824|Homo sapiens tubulin, gamma complex ... 30 9.1
BC126203-1|AAI26204.1| 1216|Homo sapiens protein tyrosine phosph... 30 9.1
BC126201-1|AAI26202.1| 1216|Homo sapiens protein tyrosine phosph... 30 9.1
BC046634-1|AAH46634.1| 907|Homo sapiens tubulin, gamma complex ... 30 9.1
BC013781-1|AAH13781.1| 824|Homo sapiens TUBGCP3 protein protein. 30 9.1
AL160033-6|CAI14456.1| 824|Homo sapiens tubulin, gamma complex ... 30 9.1
AL160033-5|CAI14455.1| 907|Homo sapiens tubulin, gamma complex ... 30 9.1
AL139384-4|CAI16950.1| 824|Homo sapiens tubulin, gamma complex ... 30 9.1
AL139384-3|CAI16949.1| 907|Homo sapiens tubulin, gamma complex ... 30 9.1
AJ003062-1|CAA05833.1| 824|Homo sapiens protein ( Homo sapiens ... 30 9.1
AJ003061-1|CAA05832.1| 907|Homo sapiens protein ( Homo sapiens ... 30 9.1
AF187044-1|AAF04087.1| 377|Homo sapiens protein tyrosine phosph... 30 9.1
AF187043-1|AAF04086.1| 405|Homo sapiens protein tyrosine phosph... 30 9.1
AF187042-1|AAF04085.1| 377|Homo sapiens protein tyrosine phosph... 30 9.1
AF152378-1|AAD55680.1| 405|Homo sapiens protein tyrosine phosph... 30 9.1
AF042378-1|AAC39727.1| 907|Homo sapiens spindle pole body prote... 30 9.1
>BC007559-1|AAH07559.1| 218|Homo sapiens eukaryotic translation
initiation factor 3, subunit 12 protein.
Length = 218
Score = 230 bits (563), Expect = 3e-60
Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 128 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 307
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 308 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 487
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 488 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 664
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 665 DGSLIFIANXDE 700
+ IFI + +E
Sbjct: 183 ESGQIFICSQEE 194
>BC001031-1|AAH01031.1| 218|Homo sapiens eukaryotic translation
initiation factor 3, subunit 12 protein.
Length = 218
Score = 230 bits (563), Expect = 3e-60
Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 128 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 307
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 308 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 487
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 488 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 664
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 665 DGSLIFIANXDE 700
+ IFI + +E
Sbjct: 183 ESGQIFICSQEE 194
>AY245432-1|AAP22070.1| 218|Homo sapiens eukaryotic translation
initiation factor 3 subunit k protein.
Length = 218
Score = 230 bits (563), Expect = 3e-60
Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 128 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 307
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 308 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 487
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 488 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 664
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 665 DGSLIFIANXDE 700
+ IFI + +E
Sbjct: 183 ESGQIFICSQEE 194
>AF315506-1|AAK01365.1| 218|Homo sapiens ARG134 protein protein.
Length = 218
Score = 230 bits (563), Expect = 3e-60
Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 128 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 307
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 308 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 487
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 488 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 664
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 665 DGSLIFIANXDE 700
+ IFI + +E
Sbjct: 183 ESGQIFICSQEE 194
>AF109355-1|AAQ13503.1| 218|Homo sapiens MSTP001 protein.
Length = 218
Score = 230 bits (563), Expect = 3e-60
Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 128 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 307
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 308 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 487
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 488 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 664
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 665 DGSLIFIANXDE 700
+ IFI + +E
Sbjct: 183 ESGQIFICSQEE 194
>AB019392-1|BAA76626.1| 218|Homo sapiens M9 protein.
Length = 218
Score = 230 bits (563), Expect = 3e-60
Identities = 108/192 (56%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 128 MAETMKQTVASILKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFN 307
M E M+ V +LK I+RYNP NL LERYVE Q++EN YDL ANLAVLKLYQFNP F
Sbjct: 3 MFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQ 62
Query: 308 ADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH 487
+T QILLKALTN PHTDFTLCKC++ ++ E I QI YL D+LE C F FW +
Sbjct: 63 TTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALD 122
Query: 488 QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW-RD 664
+ +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +LG + D LK W+ KYGW D
Sbjct: 123 ENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSAD 182
Query: 665 DGSLIFIANXDE 700
+ IFI + +E
Sbjct: 183 ESGQIFICSQEE 194
>BC007335-1|AAH07335.2| 117|Homo sapiens EIF3S12 protein protein.
Length = 117
Score = 102 bits (244), Expect = 1e-21
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +2
Query: 425 IKYLADILEQCDFAQFWNRVHQMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANL 604
I YL D+LE C F FW + + +L I+GF DS+RKF+CHVVGIT+Q ID+ LA +
Sbjct: 1 ILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEM 60
Query: 605 LGGIDDVTLKHWVKKYGW-RDDGSLIFIANXDE 700
LG + D LK W+ KYGW D+ IFI + +E
Sbjct: 61 LGDLSDSQLKVWMSKYGWSADESGQIFICSQEE 93
>AY271826-1|AAQ01753.1| 417|Homo sapiens ZYG-11A early
embryogenesis protein protein.
Length = 417
Score = 34.7 bits (76), Expect = 0.32
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +2
Query: 260 NLAVLKLYQFNPEKFNADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLA 439
NL L + P + +++TC +L KAL NFPH CLL S+ + + + +
Sbjct: 66 NLTRQGLAKGMPVRLLSEVTC-LLFKALKNFPHYQQLQKNCLL--SLTNSRILVDVPF-- 120
Query: 440 DILEQCDFAQFWNRVHQMPEL 502
D + F W H+ P++
Sbjct: 121 DRFDAAKFVMRWLCKHENPKM 141
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 974 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1015
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 868 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 909
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 203 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 244
>BC005407-1|AAH05407.1| 853|Homo sapiens NUP188 protein protein.
Length = 853
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 300 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 341
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 978 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1019
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 31.9 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNPWWKMRQ---FLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W+ R+ L T P FW N+T FG
Sbjct: 978 PLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFG 1019
>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
Length = 1293
Score = 30.7 bits (66), Expect = 5.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 360 PILHCASAYFLNP-W--WKMRQFLKSNT*PTFWSNVTLLSFG 476
P+LH A+ FL+ W W+ L T P FW N+T FG
Sbjct: 522 PLLHRAAIAFLHALWQDWRDSAMLVLRTKPKFWENLTSPLFG 563
>Z48541-1|CAA88425.1| 1216|Homo sapiens protein tyrosine phosphatase
protein.
Length = 1216
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 909 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 968
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 969 TNILPYDFS 977
>U20489-1|AAA82892.1| 1188|Homo sapiens glomerular epithelial protein
1 protein.
Length = 1188
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 881 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 940
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 941 TNILPYDFS 949
>BT009772-1|AAP88774.1| 824|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 824
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>BC126203-1|AAI26204.1| 1216|Homo sapiens protein tyrosine
phosphatase, receptor type, O protein.
Length = 1216
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 909 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 968
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 969 TNILPYDFS 977
>BC126201-1|AAI26202.1| 1216|Homo sapiens protein tyrosine
phosphatase, receptor type, O protein.
Length = 1216
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 909 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 968
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 969 TNILPYDFS 977
>BC046634-1|AAH46634.1| 907|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 907
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>BC013781-1|AAH13781.1| 824|Homo sapiens TUBGCP3 protein protein.
Length = 824
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AL160033-6|CAI14456.1| 824|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 824
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AL160033-5|CAI14455.1| 907|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 907
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AL139384-4|CAI16950.1| 824|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 824
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AL139384-3|CAI16949.1| 907|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 907
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AJ003062-1|CAA05833.1| 824|Homo sapiens protein ( Homo sapiens
mRNA for protein encoded by Saccharomyces cerevisiae
SPC98 homologue. ).
Length = 824
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AJ003061-1|CAA05832.1| 907|Homo sapiens protein ( Homo sapiens
mRNA for protein encoded by Saccharomyces cerevisiae
SPC98 homologue. ).
Length = 907
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
>AF187044-1|AAF04087.1| 377|Homo sapiens protein tyrosine
phosphatase receptor-type O truncated PTPROt protein.
Length = 377
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 70 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 129
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 130 TNILPYDFS 138
>AF187043-1|AAF04086.1| 405|Homo sapiens protein tyrosine
phosphatase receptor-type O truncated PTPROt protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 98 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 157
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 158 TNILPYDFS 166
>AF187042-1|AAF04085.1| 377|Homo sapiens protein tyrosine
phosphatase receptor-type O truncated PTPROt protein.
Length = 377
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 70 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 129
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 130 TNILPYDFS 138
>AF152378-1|AAD55680.1| 405|Homo sapiens protein tyrosine
phosphatase receptor-type O truncated PTPROT protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 164 LKSIERYNPANLEILERYVEMQSRENTYDLGANLAVLKLYQFNPEKFNADITCQILLKAL 343
LK + NP L+ + Y++ ++++ Y LKL + F AD+
Sbjct: 98 LKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRY 157
Query: 344 TNFPHTDFT 370
TN DF+
Sbjct: 158 TNILPYDFS 166
>AF042378-1|AAC39727.1| 907|Homo sapiens spindle pole body protein
spc98 homolog GCP3 protein.
Length = 907
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 335 KALTNFPHTDFTLCKCLLLESVVENETISQIKYLA--DILEQCDFAQFWNRVHQMPEL 502
K L N P L +C +L S + + I Q++Y ++LE C + + WN+V Q +L
Sbjct: 689 KLLRNMPEFSGVLHQCHILASEMVH-FIHQMQYYITFEVLE-CSWDELWNKVQQAQDL 744
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,690,549
Number of Sequences: 237096
Number of extensions: 2062914
Number of successful extensions: 7550
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 7361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7550
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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