Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_I21
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.52 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   6.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 168 EVNLSGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVT---ACTLEFFRK 338
           E NLS   +Y G+ ++     T   EY+L  ++    RKC+ +   +T      LE++  
Sbjct: 14  ERNLSYKVMYNGNNNV-----TDLVEYVLLNEDNPCARKCVKDSVPMTCRYTFLLEWYHT 68

Query: 339 VKKTC 353
           + K C
Sbjct: 69  LSKAC 73


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 501 EARVHDTKRPKPLPEPKAVYPDATPALPEDAE 596
           E  +HD +   PLP P+ V   A P L  D +
Sbjct: 101 EKGMHDQQNNNPLPSPRRV---AVPVLVRDGK 129


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 208 KEPAYKVDPDKLTSWTVNSESS 143
           K PA+KVDP ++ S   + E+S
Sbjct: 419 KGPAFKVDPTQVESEEEDEETS 440


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 162 RSTLNLRVNRRRRSPPLFYLSCITQAILN 76
           R+    R +     PP  Y+S IT AI N
Sbjct: 127 RADKTYRRSYTHAKPPYSYISLITMAIQN 155


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 528 PKPLPEPKAVYPDATPALPEDAEKKP 605
           P+P+P P+      T + P  A ++P
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASEQP 418


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 22  STDFVEGIIIFVSA 63
           S DF++ I++FVSA
Sbjct: 169 SADFIQQIMLFVSA 182


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 22  STDFVEGIIIFVSA 63
           S DF++ I++FVSA
Sbjct: 169 SADFIQQIMLFVSA 182


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 362 LSQAGLLHFPEELQCTGSD 306
           L +A ++H  EE++  GSD
Sbjct: 521 LDKADMVHLVEEIERLGSD 539


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,289
Number of Sequences: 336
Number of extensions: 3928
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)