Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_I19
         (413 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4EB73 Cluster: Putative uncharacterized protein; n=1; ...    33   2.3  
UniRef50_Q5TXC1 Cluster: ENSANGP00000026652; n=1; Anopheles gamb...    33   2.3  
UniRef50_Q0IFM4 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  

>UniRef50_A4EB73 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 409

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 125 ASECVGCTCAREHRRDTPPTSAPHTRTCTPRT 220
           AS C   TC+R  R  TPP +  H  T   RT
Sbjct: 332 ASTCTATTCSRTCRSTTPPAATRHPETSADRT 363


>UniRef50_Q5TXC1 Cluster: ENSANGP00000026652; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000026652 - Anopheles gambiae
           str. PEST
          Length = 1333

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 98  YYRGVCIEXASECVGCTCAREHRRDTPPTSAPHTRTCTPR 217
           Y  G  ++    C  C C R  R+ TP   AP  + CTPR
Sbjct: 226 YPDGEKMKSEDPCEVCYCIRGQRKCTPKKCAPTIKGCTPR 265


>UniRef50_Q0IFM4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1131

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +2

Query: 98  YYRGVCIEXASECVGCTCAREHRRDTPPTSAPHTRTCTPR 217
           Y  G  I     C  C C R  ++ TP   AP  + CTPR
Sbjct: 255 YPEGERIASQDPCQVCFCIRGDQKCTPKKCAPAIKGCTPR 294


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,081,000
Number of Sequences: 1657284
Number of extensions: 3435496
Number of successful extensions: 12708
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12702
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)