Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I11
(567 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 266 2e-70
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 221 1e-56
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 196 3e-49
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 167 1e-40
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 157 1e-37
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 147 1e-34
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 126 3e-28
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 124 1e-27
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 124 1e-27
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 122 4e-27
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 121 1e-26
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 115 9e-25
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 108 8e-23
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 108 8e-23
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 100 5e-20
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 98 1e-19
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 95 1e-18
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 76 7e-13
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 48 1e-04
UniRef50_Q7X648 Cluster: OSJNBb0089B03.1 protein; n=5; Oryza sat... 36 0.50
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 1.2
UniRef50_A1V9P0 Cluster: ComEC/Rec2-related protein; n=2; Desulf... 33 3.5
UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisia... 33 4.7
UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=... 33 6.2
UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3; Alphapr... 33 6.2
UniRef50_Q4Q871 Cluster: X-pro, dipeptidyl-peptidase,serine pept... 33 6.2
UniRef50_UPI0000EBE26D Cluster: PREDICTED: hypothetical protein;... 32 8.1
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 266 bits (652), Expect = 2e-70
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 221 bits (539), Expect = 1e-56
Identities = 106/148 (71%), Positives = 121/148 (81%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+H+ G+G+S SALP +RS P WL+ V I K K+GLTPSQIGV+LRDSHG+ QV
Sbjct: 4 MHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIH
Sbjct: 64 KSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYK LPP WKYES+TAS LVA
Sbjct: 124 RLARYYKKTKKLPPVWKYESTTASTLVA 151
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 196 bits (478), Expect = 3e-49
Identities = 92/150 (61%), Positives = 117/150 (78%)
Frame = +1
Query: 34 VVLHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVA 213
V +H G+G + SALP RR+ P WL++ + V + K ++G+ PSQIG+ LRDS G+A
Sbjct: 2 VRMHGNGRGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGIA 61
Query: 214 QVXFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESR 393
QV VTG+KILRI+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLILVESR
Sbjct: 62 QVKNVTGRKILRILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVESR 121
Query: 394 IHRLARYYKTKSVLPPNWKYESSTASALVA 483
IHRLARYYK LPP WKYESSTASA+VA
Sbjct: 122 IHRLARYYKRVKQLPPTWKYESSTASAMVA 151
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 167 bits (407), Expect = 1e-40
Identities = 91/148 (61%), Positives = 105/148 (70%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAP + LSQS LP SV WL+ +D +K QIYKL K+GLTPSQIGV LRD+HG
Sbjct: 4 MHAPRKALSQSVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHG---- 59
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
LA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L ESRIH
Sbjct: 60 ----------------LALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTESRIH 103
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
LARY KTK +LPP+WKYES +ASALVA
Sbjct: 104 PLARYCKTKRMLPPSWKYESPSASALVA 131
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 157 bits (382), Expect = 1e-37
Identities = 70/136 (51%), Positives = 100/136 (73%)
Frame = +1
Query: 55 QGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQVXFVTG 234
+G++ S +P R+ P W++ + + I L K+GL PSQIG LRDS G+ V + G
Sbjct: 6 KGIASSLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAG 65
Query: 235 KKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 414
+ I++I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+RY
Sbjct: 66 RNIVKILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRY 125
Query: 415 YKTKSVLPPNWKYESS 462
YK +P NW+++SS
Sbjct: 126 YKRIQRIPINWRFDSS 141
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 147 bits (357), Expect = 1e-34
Identities = 70/147 (47%), Positives = 100/147 (68%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HA +G S S P R+ VP W+Q + V+ + +L K+G +QIG++LRD++G+ V
Sbjct: 4 MHARKRGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGIPDV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
+TGKKI +IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+ES+I
Sbjct: 64 KLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIESKIR 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALV 480
RL +YYK+K VLP +W+Y TA LV
Sbjct: 124 RLVKYYKSKGVLPADWRYTPETARLLV 150
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 126 bits (305), Expect = 3e-28
Identities = 63/138 (45%), Positives = 90/138 (65%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HA +G S S R S P W+ + + V+ ++ +L +G PS IG++LRD +G+ V
Sbjct: 4 IHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
VTGKKI +I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I
Sbjct: 64 KQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIW 123
Query: 400 RLARYYKTKSVLPPNWKY 453
RL+ YYK K VLP +WKY
Sbjct: 124 RLSSYYKEKGVLPADWKY 141
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 124 bits (299), Expect = 1e-27
Identities = 59/142 (41%), Positives = 84/142 (59%)
Frame = +1
Query: 43 HAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQVX 222
H G S S P R + P W + V+ +I +L KQG +P+ IG++LRD +G+ V
Sbjct: 7 HKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVR 66
Query: 223 FVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHR 402
GK + ++ GL PD+P DL YL+K+A + KH+E N +D +K L+ S+IHR
Sbjct: 67 LYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHR 126
Query: 403 LARYYKTKSVLPPNWKYESSTA 468
LA+YYK K VLP +WKY A
Sbjct: 127 LAKYYKRKGVLPKDWKYSIEIA 148
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 124 bits (299), Expect = 1e-27
Identities = 55/137 (40%), Positives = 83/137 (60%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+H+ G+G S S P + P WL D +K+ + ++G +G+ IG LRD +G+ +
Sbjct: 4 MHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKA 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
V G+ I R ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV SR++
Sbjct: 64 SDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMY 123
Query: 400 RLARYYKTKSVLPPNWK 450
R+ARYYK K +P NWK
Sbjct: 124 RVARYYKRKMRIPGNWK 140
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 122 bits (295), Expect = 4e-27
Identities = 59/143 (41%), Positives = 86/143 (60%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
LH+ G S S P P W+Q P + V+ I K K+GL PSQIG LRD H +
Sbjct: 4 LHSHRHGKSHSIRPSSPKAPSWIQGPGE-VEDLIVKYAKEGLAPSQIGSKLRDQHAIPLT 62
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
+TGK + +IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+E+++H
Sbjct: 63 RPITGKSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVH 122
Query: 400 RLARYYKTKSVLPPNWKYESSTA 468
RL YYK +P +WKY+S A
Sbjct: 123 RLDVYYKRIGRIPKDWKYKSVVA 145
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 121 bits (292), Expect = 1e-26
Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HA +G S S P R + P WL+ + ++ + KL K+G + + IG +LRD +G+ V
Sbjct: 4 MHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTV 63
Query: 220 XFVT-----GKK--ILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 378
+K I RI++ GLAP++PEDL +LIK+AV +RKHLE++ KD S L
Sbjct: 64 KLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQ 123
Query: 379 LVESRIHRLARYYKTKSVLPPNWKYESSTASALV 480
L+ES+I RL +YYK K LP +W+Y+ A LV
Sbjct: 124 LIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLV 157
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 115 bits (276), Expect = 9e-25
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWL-QLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQ 216
+H G S S P P W+ Q PA+ ++ + K K GLTPSQIG+ LRD H +
Sbjct: 4 MHTHRHGKSHSIRPATLRAPSWITQSPAE-IEELVIKYSKDGLTPSQIGIKLRDQHSIPL 62
Query: 217 VXFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRI 396
+ +T K I I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+E+++
Sbjct: 63 IKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKV 122
Query: 397 HRLARYYKTKSVLPPNWKYESSTA 468
HRL+ YYK +P WKY+S A
Sbjct: 123 HRLSVYYKKIGRIPATWKYKSVVA 146
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 108 bits (260), Expect = 8e-23
Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQG-LTPSQIGVMLRDSHGVAQ 216
+++ G+G+S + +P R+ W L + + I L K L PS+IG++LRD V
Sbjct: 4 MYSKGKGISSTTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKLVVD 63
Query: 217 VXFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRI 396
++G I +I++ GL P +PEDL+YLIKKA ++ HL + D +++ L L+ES I
Sbjct: 64 TRNISGMNISKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIESHI 123
Query: 397 HRLARYYKTKSVLPPNWKYESS 462
+RL+RYYK LP NWKY S+
Sbjct: 124 YRLSRYYKRIFRLPKNWKYISN 145
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 108 bits (260), Expect = 8e-23
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +1
Query: 268 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 447
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYYK LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
Query: 448 K 450
K
Sbjct: 129 K 129
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 99.5 bits (237), Expect = 5e-20
Identities = 52/139 (37%), Positives = 76/139 (54%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+H +G S S R P W+Q D +K I K+ KQG+T S IG+ LRD + +
Sbjct: 4 MHTRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGT 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
V K+ +++K L D+PEDL LI++ KHL N+ D ++K + L+ S++
Sbjct: 64 RPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKML 123
Query: 400 RLARYYKTKSVLPPNWKYE 456
RL RYYK S LP +W E
Sbjct: 124 RLIRYYKRTSRLPQDWSLE 142
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 97.9 bits (233), Expect = 1e-19
Identities = 50/147 (34%), Positives = 80/147 (54%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
++A +G S S+ P P W A +++ I + K G++ +QIG +LRD H V V
Sbjct: 4 MYASKRGKSGSSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAVPNV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
V GK+I ++ + PEDL L+++AVA+ +HL N +D +K L L E++I
Sbjct: 64 RLVLGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIR 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALV 480
RL YYK + L +W+Y+ +V
Sbjct: 124 RLGNYYKAEGRLDSDWRYKRDQLRLIV 150
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 95.1 bits (226), Expect = 1e-18
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDS--HG-- 207
+H +G S S P P W + DA++A++ +L +QG +PS+IG+ LRD G
Sbjct: 4 MHTRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTP 63
Query: 208 VAQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 387
+ V TGKK+ I++ PDLPEDL L+++AV +R H++ N D +K L +
Sbjct: 64 IPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQ 123
Query: 388 SRIHRLARYYKTKSVLPPNWKYESSTA 468
S+I RL YY+ V N+ Y A
Sbjct: 124 SKIRRLIDYYRGDEV-DENFTYSYDNA 149
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 75.8 bits (178), Expect = 7e-13
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRD 198
+H PG+GLS+SAL SVP WL+L +D VK QIYKL K+GLTP QIGV+LRD
Sbjct: 217 IHVPGKGLSRSALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVK 132
+HAPG+GLSQSALP RRSV WL+L +D VK
Sbjct: 447 MHAPGKGLSQSALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q7X648 Cluster: OSJNBb0089B03.1 protein; n=5; Oryza
sativa|Rep: OSJNBb0089B03.1 protein - Oryza sativa
subsp. japonica (Rice)
Length = 363
Score = 36.3 bits (80), Expect = 0.50
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +3
Query: 12 RQKPQTLGRLARSWSGSLPVGAAXPPQCPSLVAIACRRCKGTNLQTWKAGSHSLTNWCNA 191
R+ P + RLA + + V A P++ A+A +L TW S+ W A
Sbjct: 23 RRAPPSAARLASNGIAFVTVAAVAAASPPAIAALAAEPANALSLPTWAVHVSSVAEWVTA 82
Query: 192 EGFTW 206
W
Sbjct: 83 MALVW 87
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 35.1 bits (77), Expect = 1.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 301 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 453
L K + + +HL+ KDK +K L L+ + +L RY + K P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_A1V9P0 Cluster: ComEC/Rec2-related protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep:
ComEC/Rec2-related protein - Desulfovibrio vulgaris
subsp. vulgaris (strain DP4)
Length = 979
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 43 HAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGV 210
+A G G++ +ALP S P W+ A V + + GL ++ +MLRD H V
Sbjct: 60 YAAGWGVALAALPETPSAPAWVTGKAQRVTGIVDDV--DGLPDGRLRIMLRDVHPV 113
>UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisiae
MRPS28: YDR337w. precursor; n=1; Aspergillus niger|Rep:
Remark: alternate name for S. cerevisiae MRPS28:
YDR337w. precursor - Aspergillus niger
Length = 280
Score = 33.1 bits (72), Expect = 4.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 301 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 450
L K + + +HL+ +KD+ +K L L+ + +L RY + K P W+
Sbjct: 212 LTAKIMNLSRHLQTTKKDRHNKRNLRLLVHKRQKLLRYLRRKERGGPRWQ 261
>UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=1;
Azoarcus sp. EbN1|Rep: Helicase/SNF2 family domain
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 883
Score = 32.7 bits (71), Expect = 6.2
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 136 QIYKLGKQGLTPSQIGVMLRDSHGVAQVXFVT-GKKILRIMKAMGLAPDLPEDLYYLI 306
++ +L + G T S V LR+ H V + + +K+ IM A+G A D PEDL L+
Sbjct: 564 RVGRLNRYGQTQSVEVVSLRNPHTVESMIWEKLEEKLGNIMLALGSAMDEPEDLLQLV 621
>UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3;
Alphaproteobacteria|Rep: 3-dehydroquinate synthase -
Parvularcula bermudensis HTCC2503
Length = 371
Score = 32.7 bits (71), Expect = 6.2
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 193 RDSHGVAQVXFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFR 372
R S + K++ R++ GL P P+D+ LI A R +++++K + + R
Sbjct: 277 RFSADCGMITEAEAKRVERMIADSGL-PTRPQDIPGLITSAAEQRAFMQQDKKVEAGQLR 335
Query: 373 LILVES 390
L+L+E+
Sbjct: 336 LVLLEA 341
>UniRef50_Q4Q871 Cluster: X-pro, dipeptidyl-peptidase,serine
peptidase, Clan SC, family S15, putative; n=2;
Leishmania|Rep: X-pro, dipeptidyl-peptidase,serine
peptidase, Clan SC, family S15, putative - Leishmania
major
Length = 686
Score = 32.7 bits (71), Expect = 6.2
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +3
Query: 30 LGRLARSWSG--SLPVGAAXPPQCPSLVAIACRRCKGTNLQTWKAGSHSLTN-W--CNAE 194
+G + +SW G SL V A PP +++ + + T+ WK G N W C +
Sbjct: 121 VGMMGKSWGGFNSLQVAARRPPALRAIIVLGFTHNRFTDDIHWKGGCLLNDNFWWGCIMQ 180
Query: 195 GFTWSCP 215
GF SCP
Sbjct: 181 GFQ-SCP 186
>UniRef50_UPI0000EBE26D Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 330
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -3
Query: 160 PAFQVCKFVPLQRRQAIATREGHCGGKAAPTGRDPDQERARRPNVC 23
P Q + VP R TR G CGG P G P R P+ C
Sbjct: 66 PPSQQVEAVPRPPRSLGRTRGGRCGGSMRPGGPRPRAPAPRSPSPC 111
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,535,134
Number of Sequences: 1657284
Number of extensions: 8799209
Number of successful extensions: 26774
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 25921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26764
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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