Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I11
(567 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles ... 254 1e-69
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 24 4.0
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 24 4.0
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 4.0
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 24 4.0
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 4.0
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 4.0
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 4.0
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 4.0
AY331407-1|AAQ97588.1| 101|Anopheles gambiae agCP14332 protein. 23 5.3
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 6.9
>U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S13 mRNA, complete
cds. ).
Length = 151
Score = 254 bits (623), Expect = 1e-69
Identities = 118/148 (79%), Positives = 136/148 (91%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+G+S+SALP RRSVP WL+L A+ VK QI KLGK+G+TPSQIG++LRDSHGVAQV
Sbjct: 4 MHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ESRIH
Sbjct: 64 RFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYK K+VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKIKAVLPPNWKYESSTASALVA 151
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.8 bits (49), Expect = 4.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 93 CPSLVAIACRRCKGTNLQTWKA 158
CP L C RCK T + A
Sbjct: 183 CPVLQTFVCMRCKATGTKAHTA 204
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.8 bits (49), Expect = 4.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 93 CPSLVAIACRRCKGTNLQTWKA 158
CP L C RCK T + A
Sbjct: 184 CPVLQTFVCMRCKATGTKAHTA 205
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 201 TWSCPSKXRNWQKDPP 248
TWS P+ W PP
Sbjct: 164 TWSAPTTTTTWSDQPP 179
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 201 TWSCPSKXRNWQKDPP 248
TWS P+ W PP
Sbjct: 164 TWSAPTTTTTWSDQPP 179
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 201 TWSCPSKXRNWQKDPP 248
TWS P+ W PP
Sbjct: 164 TWSAPTTTTTWSDQPP 179
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 201 TWSCPSKXRNWQKDPP 248
TWS P+ W PP
Sbjct: 163 TWSAPTTTTTWSDQPP 178
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 201 TWSCPSKXRNWQKDPP 248
TWS P+ W PP
Sbjct: 163 TWSAPTTTTTWSDQPP 178
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 201 TWSCPSKXRNWQKDPP 248
TWS P+ W PP
Sbjct: 164 TWSAPTTTTTWSDQPP 179
>AY331407-1|AAQ97588.1| 101|Anopheles gambiae agCP14332 protein.
Length = 101
Score = 23.4 bits (48), Expect = 5.3
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +3
Query: 45 RSWSGSL---PVGAAXPPQCPSLVAIACRRCKGTNLQTW 152
R+ GSL PV A A + CKGTN + W
Sbjct: 58 RTRCGSLCGSPVSRAQTDDDDDAAAASVMWCKGTNTEEW 96
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.0 bits (47), Expect = 6.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 300 PDQESCCNEETLG 338
P QES CNEE +G
Sbjct: 946 PMQESPCNEEKIG 958
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,380
Number of Sequences: 2352
Number of extensions: 9038
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -