Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I11
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 266 4e-71
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 266 4e-71
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 266 4e-71
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 266 4e-71
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 266 4e-71
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 266 4e-71
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 266 4e-71
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 266 4e-71
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 199 6e-51
BC063562-1|AAH63562.1| 337|Homo sapiens sideroflexin 4 protein. 30 6.5
AY269785-1|AAP97074.1| 305|Homo sapiens sideroflexin protein. 30 6.5
AL355861-1|CAI15801.1| 337|Homo sapiens sideroflexin 4 protein. 30 6.5
AL355598-1|CAI14126.1| 337|Homo sapiens sideroflexin 4 protein. 30 6.5
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 266 bits (652), Expect = 4e-71
Identities = 126/148 (85%), Positives = 138/148 (93%)
Frame = +1
Query: 40 LHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQV 219
+HAPG+GLSQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV
Sbjct: 4 MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQV 63
Query: 220 XFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIH 399
FVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIH
Sbjct: 64 RFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIH 123
Query: 400 RLARYYKTKSVLPPNWKYESSTASALVA 483
RLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 124 RLARYYKTKRVLPPNWKYESSTASALVA 151
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 199 bits (485), Expect = 6e-51
Identities = 96/116 (82%), Positives = 106/116 (91%)
Frame = +1
Query: 64 SQSALPXRRSVPPWLQLPADAVKAQIYKLGKQGLTPSQIGVMLRDSHGVAQVXFVTGKKI 243
SQSALP RRSVP WL+L +D VK QIYKL K+GLTPSQIGV+LRDSHGVAQV FVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 244 LRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 411
LRI+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 61 LRILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>BC063562-1|AAH63562.1| 337|Homo sapiens sideroflexin 4 protein.
Length = 337
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 254 MIRRIFLPVTXLTWATPCESLSITPICEGVRPCF-PSL*ICAFTASAGNCN 105
+I ++F P L + P LS+TP+ +G++ P + +CA+ A+ + N
Sbjct: 103 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSIN 152
>AY269785-1|AAP97074.1| 305|Homo sapiens sideroflexin protein.
Length = 305
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 254 MIRRIFLPVTXLTWATPCESLSITPICEGVRPCF-PSL*ICAFTASAGNCN 105
+I ++F P L + P LS+TP+ +G++ P + +CA+ A+ + N
Sbjct: 94 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSIN 143
>AL355861-1|CAI15801.1| 337|Homo sapiens sideroflexin 4 protein.
Length = 337
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 254 MIRRIFLPVTXLTWATPCESLSITPICEGVRPCF-PSL*ICAFTASAGNCN 105
+I ++F P L + P LS+TP+ +G++ P + +CA+ A+ + N
Sbjct: 103 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSIN 152
>AL355598-1|CAI14126.1| 337|Homo sapiens sideroflexin 4 protein.
Length = 337
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 254 MIRRIFLPVTXLTWATPCESLSITPICEGVRPCF-PSL*ICAFTASAGNCN 105
+I ++F P L + P LS+TP+ +G++ P + +CA+ A+ + N
Sbjct: 103 LIPKLFRPAAFLPFMAPTVFLSMTPL-KGIKSVILPQVFLCAYMAAFNSIN 152
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,228,893
Number of Sequences: 237096
Number of extensions: 1406084
Number of successful extensions: 3783
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3782
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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