Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_I11
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   1.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.9  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 22  RKHWVVLHAPGQGLSQSALPXRRSVPPWLQLPADAVKAQIYKL 150
           RK WV      +   QS LP +  + P+L+    + +   Y+L
Sbjct: 245 RKAWVASFGRPKMTPQSLLPSQTGLSPYLRFGCLSTRLFYYQL 287


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 132 GTNLQTWKAGSHSLT 176
           G+NL  W+A + SLT
Sbjct: 28  GSNLPVWEAAAASLT 42


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 132 GTNLQTWKAGSHSLT 176
           G+NL  W+A + SLT
Sbjct: 28  GSNLPVWEAAAASLT 42


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 132 GTNLQTWKAGSHSLT 176
           G+NL  W+A + SLT
Sbjct: 28  GSNLPVWEAAAASLT 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,185
Number of Sequences: 438
Number of extensions: 2073
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)