Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I09
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10530| Best HMM Match : UBA (HMM E-Value=0.0016) 46 5e-05
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2) 31 1.6
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 31 1.6
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 30 2.1
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 30 2.7
SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 29 3.6
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_52288| Best HMM Match : Coprinus_mating (HMM E-Value=0.86) 28 8.4
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 8.4
>SB_10530| Best HMM Match : UBA (HMM E-Value=0.0016)
Length = 74
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 620 IVMSQANVSRAKAVRALKNNQSDIVNAIM 706
+VM QANVSR KA+ ALK N++DIVNAIM
Sbjct: 13 LVMQQANVSRNKAIMALKKNENDIVNAIM 41
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +2
Query: 440 AKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
A+IE T T AA E APETTA + TT AP
Sbjct: 653 AEIETTMTPETNAAPETTSAPETTAAPETTAAPETTAAP 691
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E T T AA E APETTA + + TT AP
Sbjct: 542 ETTMTPETTAAPETTTAPETTAASETTAASETTAAP 577
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 437 EAKIEDLSTQA--TMAAAERFKAPETTATGNDASTTGTTVAP 556
E +E +T+A + AA E K PETTA + + TTVAP
Sbjct: 476 ETTVEPETTKAPESAAAPETTKEPETTAAPDTTAAPETTVAP 517
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E S T AA E APETTA + TT AP
Sbjct: 710 ETTSASETTAAPETTTAPETTAASETTAVLETTAAP 745
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T A E APETTAT + + T TT AP
Sbjct: 921 TTAVPETTAAPETTATPDTTAATETTAAP 949
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA E APETTA S + TT AP
Sbjct: 686 ETTAAPETTAAPETTAAPETTAAPETTSASETTAAP 721
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 386 SPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+P+ + P + T + A E + T AA E APETTA + TT AP
Sbjct: 834 APETTETPET-TAVPETTAAPETTAVPETTAAPETTAAPETTAAPETTAAPETTAAP 889
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/83 (24%), Positives = 28/83 (33%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAPIAXXXXXXXXXXXXXXXXXXXIVM 628
E ST T+AA+E APETTA T +V +
Sbjct: 968 ETTSTPGTLAASETTAAPETTAKPETTETPAASVVTAEVITESLSTAEPQVKFTTAAPIS 1027
Query: 629 SQANVSRAKAVRALKNNQSDIVN 697
S++ + A A + I N
Sbjct: 1028 SESPETTAAVTTASPTTDAPITN 1050
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E S T AA E APETTA + TT AP
Sbjct: 668 ETTSAPETTAAPETTAAPETTAAPETTAAPETTAAP 703
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +2
Query: 386 SPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+PD P + T + A E +T T AA E APETTA + TT P
Sbjct: 912 APDTTAAPDT-TAVPETTAAPETTATPDTTAATETTAAPETTAVPETTAAPETTSTP 967
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T A E APETTAT + TTVAP
Sbjct: 513 TTVAPETTIAPETTATPETTAAPETTVAP 541
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA E APETTA + TT AP
Sbjct: 860 ETTAAPETTAAPETTAAPETTAAPETTAAPDTTAAP 895
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA+E AP+TTA ++ TT AP
Sbjct: 560 ETTAASETTAASETTAAPKTTAAPKTSAAPETTAAP 595
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA E APETT + TTVAP
Sbjct: 590 ETTAAPETTAAPETTMAPETTTAPETTAKAETTVAP 625
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA E APETTA + TT AP
Sbjct: 674 ETTAAPETTAAPETTAAPETTAAPETTAAPETTAAP 709
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 440 AKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
A+ E + T A+E APETTA + + TT AP
Sbjct: 755 AEPETTAASETTVASETTAAPETTAAPDTSVAPETTAAP 793
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA E APETTA T TT P
Sbjct: 812 ETTAAPETTAAPETTAAPETTAAPETTETPETTAVP 847
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 437 EAKIEDLSTQA--TMAAAERFKAPETTATGNDASTTGTTVAP 556
E +E +T A T AAE APETT + GTTVAP
Sbjct: 5131 ETTVEPETTMALETTVAAETTMAPETTVSPETTEAPGTTVAP 5172
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 428 VFGEAKIEDLSTQA--TMAAAERFKAPETTATGNDASTTGTTVAP 556
V E E +TQA T E KAPETT T TTVAP
Sbjct: 3149 VASETTAEPDTTQAPETTVTPETTKAPETTVASETTVTPETTVAP 3193
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 446 IEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+E + ++T A+ E APETTA + TTVAP
Sbjct: 1235 LETTAPESTSASTESTVAPETTAVPETTAAHETTVAP 1271
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T AAE APETT +T TTVAP
Sbjct: 4007 TTVAAETTMAPETTLASETTTTPDTTVAP 4035
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T AAE APETT +T TTVAP
Sbjct: 4115 TTVAAETTMAPETTLASETTTTPDTTVAP 4143
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 413 SDTYIVFGEAKIEDLSTQA-TMAAAERFKAPETTATGNDASTTGTTVAP 556
SDT + + +++ T AAA+ APETTA TTVAP
Sbjct: 3807 SDTTVAPETTVVPEITVAPETTAAADTTMAPETTAISETTFAPETTVAP 3855
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T AA E PETT + + TTVAP
Sbjct: 3785 TTAARETIAVPETTVASETTAASDTTVAP 3813
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T A E KAPETT T TT AP
Sbjct: 4283 TTVAPETTKAPETTVASKTTKTPETTFAP 4311
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E +T T A E APETT TTVAP
Sbjct: 4132 ETTTTPDTTVAPETTMAPETTVAAETTMAPETTVAP 4167
>SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2)
Length = 233
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 416 DTYIVFGEAKIEDLSTQA-TMAAAERFKAPETTATGNDASTTGTTVAP 556
DT +V + D + A T AA E APETT S TTVAP
Sbjct: 147 DTTLVPDTTLVPDTTVAAETTAAPETTVAPETTVVTETTSAPVTTVAP 194
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 446 IEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+E T AAE AP+TT ++ TTVAP
Sbjct: 104 LETTMAPETTVAAESTDAPDTTVAAETTASAETTVAP 140
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 416 DTYIVFGEAKIEDLSTQA-TMAAAERFKAPETTATGNDASTTGTTVAP 556
DT +V + D + A T AA E APETT S TTVAP
Sbjct: 1593 DTTLVPDTTLVPDTTVAAETTAAPETTVAPETTVVTETTSAPVTTVAP 1640
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 458 STQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+T T AA E APETTA TT+AP
Sbjct: 1272 TTLETTAALETTMAPETTAAAETTDEPATTMAP 1304
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AAE AP+TT ++ TTVAP
Sbjct: 1969 ETTAAAETTVAAETIAAPDTTVAAETTASAETTVAP 2004
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AAAE APETTA ++ TT+ P
Sbjct: 2929 ETTAAAETTAAAETTAAPETTAAPETSAAPDTTMVP 2964
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E AT AA E APETT + TT+AP
Sbjct: 877 ETTDAPATTAARETTAAPETTMASETTMASETTMAP 912
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 446 IEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+E T AAE AP+TT ++ TTVAP
Sbjct: 1550 LETTMAPETTVAAESTDAPDTTVAAETTASAETTVAP 1586
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E T T AAAE APETTA ++ TT+ P
Sbjct: 2331 ETTVTAETTAAAETTVAPETTAVLETSAAPETTMVP 2366
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 416 DTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+T V G E + AT+ A E APETT + TT+AP
Sbjct: 419 ETTAVPGTMVPETTAAPATIIAPETTAAPETTMAPGTTAAPETTMAP 465
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 386 SPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
SP+ P + A + L +TMA APETTA + TTVAP
Sbjct: 1853 SPETIAEPETTVAPETTTAPVTTLPPDSTMAPKSTL-APETTAAPDTTLAPETTVAP 1908
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAPIA 562
T AA E APETTA TT+AP A
Sbjct: 515 TTAAPETTMAPETTAAPETTMAPETTIAPEA 545
Score = 28.3 bits (60), Expect = 8.4
Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 1/157 (0%)
Frame = +2
Query: 89 PELTELDKAT-ASMTEKRKEETAXXXXXXXXNIPELEDAGAPDAGGITNPIAGIDIVSKS 265
PE T + T A+ T E TA LE A + A + +
Sbjct: 1239 PETTAAPETTMAAETTMAPETTAAETTAATVTTTTLETTAALETTMAPETTAAAETTDEP 1298
Query: 266 KQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 445
+ + + L + E ++ + ++P P + V A
Sbjct: 1299 ATTMAPETTAAPETSLAPETTAAPETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAP 1358
Query: 446 IEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + AT+AA E ETT +++ TTVAP
Sbjct: 1359 -ETTAVPATIAALETTATLETTMVPETTASSETTVAP 1394
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T AAE AP+TT ++ TTVAP
Sbjct: 2036 TTVAAESTDAPDTTVAAETTASAETTVAP 2064
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 440 AKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
A E + T AA E AP+TT S TT+AP
Sbjct: 2938 AAAETTAAPETTAAPETSAAPDTTMVPQTTSAPATTMAP 2976
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T A E APETTA + TTVAP
Sbjct: 3260 ETTAAPETTLARETTVAPETTAASETTAAPETTVAP 3295
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 VQGVERVT-IRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAP 502
+ GV T + ++ + P+ P + T + A E + T AA+E AP
Sbjct: 2589 ITGVSETTAVPETTSGPMTTTGPETTAAPET-TAVPETSAAPETAAVPETTAASETTAAP 2647
Query: 503 ETTATGNDASTTGTTVAP 556
ETTA + + TT AP
Sbjct: 2648 ETTAVPETTAASETTAAP 2665
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E S Q T AA E APETTA + TT P
Sbjct: 2029 ETSSVQETTAAPETTAAPETTAAPEATAAPETTAPP 2064
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AA+E APETTA + GTT P
Sbjct: 2648 ETTAVPETTAASETTAAPETTAVLGTTAVPGTTSVP 2683
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 386 SPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+P+ P + T + A E S T A + APETT+ + GTT AP
Sbjct: 2363 APETTSAPKT-TAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAP 2418
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 446 IEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+E S + AA E APETT A+ TTVAP
Sbjct: 809 LETTSAPESTAATESTVAPETTVPTETAAAPDTTVAP 845
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E T T AAAE APETTA ++ TT+ P
Sbjct: 1079 ETTVTAETTAAAETTVAPETTAVLETSAAPETTMVP 1114
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E + T AAE AP+TT ++ TTVAP
Sbjct: 168 ETTAAAETTVAAETIAAPDTTVAAETTASAETTVAP 203
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 386 SPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
SP+ P + A + L +TMA APETTA + TTVAP
Sbjct: 52 SPETIAEPETTVAPETTTAPVTTLPPDSTMAPKSTL-APETTAAPDTTLAPETTVAP 107
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 470 TMAAAERFKAPETTATGNDASTTGTTVAP 556
T AAE AP+TT ++ TTVAP
Sbjct: 223 TTVAAESTDAPDTTVAAETTASAETTVAP 251
>SB_12501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 371 LFVINSPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAER 490
LF NSP++ HSD +++ A LST +A+ R
Sbjct: 40 LFSSNSPELSAAAHSDLHLLRSSASFSQLSTSRPIASISR 79
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 319 ETEFTHYLSGLLLTTRLFRFADDVNASNWVSDSTCIW 209
E F HY + ++ + R R DV+ N+V S CIW
Sbjct: 751 EKVFQHYSTDVIDSGRRGRGRRDVSHDNYVCQSYCIW 787
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E S Q T AA E APETTA + TT P
Sbjct: 97 ETSSVQETTAAPETTAAPETTAAPEATAAPETTAPP 132
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 449 EDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
E S Q T AA E APETTA + TT P
Sbjct: 3184 ETSSVQETTAAPETTAAPETTAAPEATAAPETTAPP 3219
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 440 AKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
A E + T AAE PET AT + GTT AP
Sbjct: 2965 ASPETTAKPDTTGAAETTFVPETIATPETTTVPGTTAAP 3003
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 386 SPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAP 556
+P+ P + T + A E S T A + APETT+ + GTT AP
Sbjct: 2906 APETTSAPKT-TAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAP 2961
>SB_52288| Best HMM Match : Coprinus_mating (HMM E-Value=0.86)
Length = 769
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 638 NVSRAKAVRALKNNQSDIVNAIMELTM*EKPSSQYLMS 751
N+S+A+ +R K +D+VN + E KP S+ + S
Sbjct: 237 NLSKAEKMRMFKRMYTDVVNDLQEQVKEAKPQSRPVFS 274
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 464 QATMAAAERFKAPETTATGNDASTTGTTVAPI 559
Q T AA E APETT + TT AP+
Sbjct: 150 QETTAAPETTVAPETTVAPETTAALETTAAPV 181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,966,609
Number of Sequences: 59808
Number of extensions: 407027
Number of successful extensions: 1987
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -