Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_I09
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   3.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.7  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.9  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 709  ANNVGEAFVTISYVTAVSFKSLSTLXLDEKSNEHMHNRR 825
            A  +   F T+ Y TAV    L  + L  K +  +H+RR
Sbjct: 891  AIGLARTFRTVRYETAVLLAGLLPICLAIKEDTRVHSRR 929


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 71  EVILSRRRXLLKISEYEKSYL 9
           E +L  ++ L++ISE EK YL
Sbjct: 375 EQLLHEKQNLIRISELEKDYL 395


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 706 GANNVGEAFVTISYVTAVSFKSLSTLXLDEKSNEHMHN 819
           G+N    A     Y TA +  + S L L  K+  H H+
Sbjct: 767 GSNTPNSAAAPHPYYTAAAMAAASPLSLSSKAPPHPHS 804


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -3

Query: 549 TVVPVVEASLPVAVVSGALNLSAAAMVACVDKSSILASPK 430
           T   VV A LPV VVS AL       +  +   S+ A P+
Sbjct: 52  TAAVVVNADLPVKVVSKALKGLMVVDIGDMRVVSVYAPPR 91


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +2

Query: 248  DIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPD-VYKNPHSDTY 424
            D V + + +R    A   M        Q ++ +  +  + I FV+  PD   +N  + T 
Sbjct: 1300 DKVCRGETNRRWSMALSSMGGHSQTSAQSLQSIAGQTERKISFVLQEPDNESENSSNTTL 1359

Query: 425  IVFGEAKIEDLSTQATMAAAERF 493
             + GE  ++ +   AT+   +R+
Sbjct: 1360 TIQGEENVQRM-WLATVVPCDRW 1381


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 241 SNWVSDST---CIWCTCIFQFWNVVIR 170
           +NWVSDST    IW +  F    ++ R
Sbjct: 43  NNWVSDSTGTAAIWASGRFPIQQIISR 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,673
Number of Sequences: 2352
Number of extensions: 13082
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)