Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_I05
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +1

Query: 142  QRLHP---SSCGTAWSSCSTKMWS*TTT 216
            + +HP   +   T WSS +T  W  TTT
Sbjct: 1029 EHMHPDWTTKPSTWWSSTTTSPWWTTTT 1056


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 171 GMVEL*YKDVVINYHKLKTWC 233
           G+V L Y++      K KT+C
Sbjct: 387 GLVNLKYRETYFRLSKTKTFC 407


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 398 RTYEANSVFLADINNVRTVNKTYI 469
           R+Y   SVFL DI  + T+  T I
Sbjct: 68  RSYSNFSVFLFDIITIVTLTSTSI 91


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 479 NNLERFVLVMFDNDSIVQPK 538
           N    F  + F+ND I+QPK
Sbjct: 573 NKTYDFHNMSFENDFIIQPK 592


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 338 YMQRN*VASSHHHMF-RVSRHHNE 270
           Y +++    SHHH    V+ HH+E
Sbjct: 4   YFEQSGFYGSHHHQSGSVAGHHHE 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,104
Number of Sequences: 336
Number of extensions: 3595
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)