Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I05
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl prote... 184 6e-47
AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl pro... 175 4e-44
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 29 4.6
Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z48783-6|CAA88700.1| 371|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl protein
thioesteraseprotein 1 protein.
Length = 270
Score = 184 bits (448), Expect = 6e-47
Identities = 83/186 (44%), Positives = 124/186 (66%)
Frame = +2
Query: 179 RAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLNYAAYNSWVQNS 358
RAV QRC + P +KN+VS+GGQHQG++G P+C + C+ VR+L++ AY +VQ
Sbjct: 86 RAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIMCNGVRRLIDLGAYLPFVQKR 142
Query: 359 LVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNNLERFVLVMFDNDSIVQPK 538
+VQA YWHDP Y+ S+FLADINN N TY +NL +L+ VLV F+ D +V PK
Sbjct: 143 VVQAQYWHDPNQVEEYKKRSIFLADINNENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPK 202
Query: 539 ETEWFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGKLIFLSTPGDHLRFTEEWMIK 718
++ WFGFY G + ++ + E+ +Y +DR+GLKK+ ++G++ F+ GDHL+ ++
Sbjct: 203 DSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIHFMDVDGDHLQIPRSVLVN 262
Query: 719 NIIKPY 736
+IIK Y
Sbjct: 263 DIIKKY 268
>AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl
protein thioesterase protein.
Length = 254
Score = 175 bits (425), Expect = 4e-44
Identities = 79/172 (45%), Positives = 117/172 (68%)
Frame = +2
Query: 179 RAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLNYAAYNSWVQNS 358
RAV QRC + P +KN+VS+GGQHQG++G P+C + C+ VR+L++ AY +VQ
Sbjct: 86 RAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIMCNGVRRLIDLGAYLPFVQKR 142
Query: 359 LVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNNLERFVLVMFDNDSIVQPK 538
+VQA YWHDP Y+ S+FLADINN N TY +NL +L+ VLV F+ D +V PK
Sbjct: 143 VVQAQYWHDPNQVXEYKKRSIFLADINNENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPK 202
Query: 539 ETEWFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGKLIFLSTPGDHLR 694
++ WFGFY G + ++ + E+ +Y +DR+GLKK+ ++G++ F+ GDHL+
Sbjct: 203 DSXWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIHFMDVDGDHLQ 254
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 581 SRPVPERKNRTIPSPSAALCYHYRTSPARIFLD 483
SRP P + PSPS +L R PA +++D
Sbjct: 667 SRPAPATSSVVTPSPSQSLTQQIRKLPAVLYID 699
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -2
Query: 677 ALIRKLIFPLYPFS*GRVDPANKS*IPLTIPISRPVPERKNRTIPSPSAALCYHYRTSP 501
A+ R FP P S G P+ + IP + +RP P + P+P+ Y + +P
Sbjct: 127 AVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAP 185
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 YAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNNL 487
YA YN + + LV++TYW P E T + S AD+ + + + ++ +L
Sbjct: 451 YALYNRYGFH-LVRSTYWMVPAPEVTKKLFSTLRADLKFPTKIGEAEVASVRDL 503
>Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical
protein W04E12.4 protein.
Length = 227
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 287 RHETCDDV-RKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 463
++ET DD+ +L+ + Y W+ +L +A R YE + + I+ R K
Sbjct: 13 KNETWDDILNELMENSEY--WMDMTLPKAE------QRRNYEKMAEVMRRIDVCRERQKA 64
Query: 464 YIQNLNNLERFVLVMFDNDSIVQPKETE 547
+Q L NLE+ V +N + + +E E
Sbjct: 65 TLQKLRNLEKLV-EQDENGAEISEEEQE 91
>Z48783-6|CAA88700.1| 371|Caenorhabditis elegans Hypothetical
protein F33H1.5 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 480 FKFCIYVLLTVLTLLMSARNTLFA--SYVRSSKGSCQYVA 367
F F I+ LLT + L++ + T+F+ S G C+YV+
Sbjct: 66 FNFAIFDLLTCVASLLACQKTIFSGLSLTYIFHGPCKYVS 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,301
Number of Sequences: 27780
Number of extensions: 339663
Number of successful extensions: 779
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -