Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_I04
(737 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 3.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 3.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 3.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 3.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.4
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 22 4.5
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 5.9
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 7.9
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 7.9
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 215 KATEHVIGCVLC 226
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 529 KATEHVIGCVLC 540
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 789 KATEHVIGCVLC 800
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 789 KATEHVIGCVLC 800
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 762 KATEHVIGCVLC 773
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 762 KATEHVIGCVLC 773
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 789 KATEHVIGCVLC 800
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 60 KITQELLGCVLC 25
K T+ ++GCVLC
Sbjct: 789 KATEHVIGCVLC 800
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 415 WNSHSLLSSGQTC 377
WN H LL++ Q C
Sbjct: 348 WNPHKLLTAPQQC 360
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 432 FNDHTFGTPILYCLVDKLVESSTNGKYSGNGMHDYK 325
F H I + V +S+ NG+ N +H YK
Sbjct: 118 FGAHWMKESISFAKVKLTNKSNGNGQIMLNSLHKYK 153
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 251 YVISANSTVVDNNIPS 204
YVI N+ V+ NIPS
Sbjct: 133 YVIRGNTAVLKCNIPS 148
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -1
Query: 638 FLFIIIGVYYFYARLL 591
F+FI++ ++Y A L+
Sbjct: 245 FIFIVVSIFYMSAYLI 260
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,459
Number of Sequences: 336
Number of extensions: 3982
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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