Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_H24
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate trans... 117 6e-27
U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate trans... 113 8e-26
D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate trans... 113 8e-26
D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate trans... 113 8e-26
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 112 2e-25
U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate trans... 111 4e-25
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 110 9e-25
U58746-1|AAB00621.2| 558|Caenorhabditis elegans Glutamate trans... 102 3e-22
Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical pr... 97 9e-21
Z68879-3|CAA93084.1| 532|Caenorhabditis elegans Hypothetical pr... 85 5e-17
AF125964-9|AAD14749.2| 523|Caenorhabditis elegans Glutamate tra... 84 7e-17
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 29 2.1
U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical pr... 28 4.9
>U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate
transporter family protein4 protein.
Length = 499
Score = 117 bits (282), Expect = 6e-27
Identities = 56/116 (48%), Positives = 80/116 (68%)
Frame = +3
Query: 198 KFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLL 377
K +ENLL + TV+GV G LG LR WSKR + Y +FPG+LF++MLK LI+P++
Sbjct: 3 KLSKENLLLLFTVLGVVVGIGLGFSLRDPSKAWSKRHLSYLRFPGDLFVQMLKMLILPMI 62
Query: 378 VSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEE 545
+SSI++++ SLD +G++G+ ++IYY TT AV LGI LV+ IKPG + N E
Sbjct: 63 MSSIITSLASLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKPGKWTTTNIE 118
>U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate
transporter family protein1, isoform a protein.
Length = 503
Score = 113 bits (273), Expect = 8e-26
Identities = 64/156 (41%), Positives = 88/156 (56%)
Frame = +3
Query: 174 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 353
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 354 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSK 533
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG +
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
Query: 534 GNEELNTTKIVTKXXXXXXXXXXXXRNVFPXNIPQA 641
E T+ K RN+FP N+ QA
Sbjct: 124 KKEIGTGTE--GKTVSTVDTLLDLLRNMFPENVVQA 157
>D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 113 bits (273), Expect = 8e-26
Identities = 64/156 (41%), Positives = 88/156 (56%)
Frame = +3
Query: 174 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 353
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 354 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSK 533
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG +
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
Query: 534 GNEELNTTKIVTKXXXXXXXXXXXXRNVFPXNIPQA 641
E T+ K RN+FP N+ QA
Sbjct: 124 KKEIGTGTE--GKTVSTVDTLLDLLRNMFPENVVQA 157
>D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 113 bits (273), Expect = 8e-26
Identities = 64/156 (41%), Positives = 88/156 (56%)
Frame = +3
Query: 174 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 353
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 354 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSK 533
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG +
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
Query: 534 GNEELNTTKIVTKXXXXXXXXXXXXRNVFPXNIPQA 641
E T+ K RN+FP N+ QA
Sbjct: 124 KKEIGTGTE--GKTVSTVDTLLDLLRNMFPENVVQA 157
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 112 bits (270), Expect = 2e-25
Identities = 64/156 (41%), Positives = 87/156 (55%)
Frame = +3
Query: 174 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 353
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 354 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSK 533
K +I PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG +
Sbjct: 64 KMMIPPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTI 123
Query: 534 GNEELNTTKIVTKXXXXXXXXXXXXRNVFPXNIPQA 641
E T+ K RN+FP N+ QA
Sbjct: 124 KKEIGTGTE--GKTVSTVDTLLDLLRNMFPENVVQA 157
>U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate
transporter family protein1, isoform b protein.
Length = 492
Score = 111 bits (267), Expect = 4e-25
Identities = 63/147 (42%), Positives = 84/147 (57%)
Frame = +3
Query: 201 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 380
+IR+NLL +LTV V G L CG G Q S +++MY FPGEL + MLK +I+PL++
Sbjct: 4 WIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMILPLIM 61
Query: 381 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEELNTTK 560
SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG + E T+
Sbjct: 62 SSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTIKKEIGTGTE 121
Query: 561 IVTKXXXXXXXXXXXXRNVFPXNIPQA 641
K RN+FP N+ QA
Sbjct: 122 --GKTVSTVDTLLDLLRNMFPENVVQA 146
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 110 bits (264), Expect = 9e-25
Identities = 63/147 (42%), Positives = 83/147 (56%)
Frame = +3
Query: 201 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 380
+IR+NLL +LTV V G L CG G Q S +++MY FPGEL + MLK +I PL++
Sbjct: 4 WIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMIPPLIM 61
Query: 381 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEELNTTK 560
SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG + E T+
Sbjct: 62 SSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPGDPTIKKEIGTGTE 121
Query: 561 IVTKXXXXXXXXXXXXRNVFPXNIPQA 641
K RN+FP N+ QA
Sbjct: 122 --GKTVSTVDTLLDLLRNMFPENVVQA 146
>U58746-1|AAB00621.2| 558|Caenorhabditis elegans Glutamate
transporter family protein6 protein.
Length = 558
Score = 102 bits (244), Expect = 3e-22
Identities = 55/148 (37%), Positives = 84/148 (56%)
Frame = +3
Query: 198 KFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLL 377
+F REN L ++T+ V G +LG GLR S+ + FPGE+F+++LK +I+PL+
Sbjct: 11 QFCRENTLLVMTMFSVFLGVVLGFGLRPLN--LSQETLQLINFPGEIFMQVLKMMILPLI 68
Query: 378 VSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEELNTT 557
SS++SA+ +D SG++G ++YY++T V A +LGI LVT I PG S +++
Sbjct: 69 FSSLISALAQMDAKESGQMGASTVLYYLSTAVLATILGIFLVTVIHPGDPSIKGTDISEA 128
Query: 558 KIVTKXXXXXXXXXXXXRNVFPXNIPQA 641
RN+FP NI QA
Sbjct: 129 P-SDGNVSPLDTFLDLVRNMFPENIIQA 155
>Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical
protein Y53C12A.2 protein.
Length = 491
Score = 97.1 bits (231), Expect = 9e-21
Identities = 52/147 (35%), Positives = 84/147 (57%)
Frame = +3
Query: 201 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 380
++ +N+L ++T+ G+ G ++G LR + S + Y FPGELF+ MLK++++PL+
Sbjct: 15 WLTKNMLLLMTMAGIVMGVIIGGVLRTADP--SPDVIRYVGFPGELFMNMLKAMVLPLIA 72
Query: 381 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEELNTTK 560
+SIVS + LD SG++G RA++YY TT AV+LGI +V+ I+PG + + +
Sbjct: 73 ASIVSGLSQLDGKTSGRLGSRAVMYYAITTTHAVILGIIVVSIIQPGDPTIKQKMGYDKE 132
Query: 561 IVTKXXXXXXXXXXXXRNVFPXNIPQA 641
RN FP NI +A
Sbjct: 133 GEAANVSAAQKFLDLFRNAFPENIMRA 159
>Z68879-3|CAA93084.1| 532|Caenorhabditis elegans Hypothetical
protein K08F4.4 protein.
Length = 532
Score = 84.6 bits (200), Expect = 5e-17
Identities = 48/146 (32%), Positives = 81/146 (55%)
Frame = +3
Query: 204 IRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLVS 383
++++LL +LT+ V G +LG +R S + FPGE+F+++++ +I+PL++S
Sbjct: 3 MKKDLLLVLTIESVVLGVVLGFVIRPFNP--SNDTISLIGFPGEIFMQIVEMMILPLIMS 60
Query: 384 SIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEELNTTKI 563
S++SA+ + + ++G+ IIYYM TT A GI LV++I PG + + EL +
Sbjct: 61 SVISALAQVRARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG-DPELIHELGEGTL 119
Query: 564 VTKXXXXXXXXXXXXRNVFPXNIPQA 641
RN+FP NI QA
Sbjct: 120 ENTALSTLDTFLDQIRNMFPENIIQA 145
>AF125964-9|AAD14749.2| 523|Caenorhabditis elegans Glutamate
transporter family protein7 protein.
Length = 523
Score = 84.2 bits (199), Expect = 7e-17
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Frame = +3
Query: 204 IRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLVS 383
++E+ L + T++ V G G LR + R+++ FPGE+F+++LK +++PL+ S
Sbjct: 6 MKESQLLVFTLIAVGIGFASGILLRQFDLSDNARNLV--GFPGEIFMQVLKLMVLPLIFS 63
Query: 384 SIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGS-NSKGNEELNTTK 560
S++S++G +D S SGK+ AI YY+TT + A +G+A+V PG + + + +
Sbjct: 64 SLISSLGQMDASRSGKMSFIAIAYYLTTVIIASCIGVAMVFLFHPGDPDMRSHRPEDVVI 123
Query: 561 IVTKXXXXXXXXXXXXRNVFPXNIPQA 641
RN+FP NI +A
Sbjct: 124 REDNNISALDSILDLIRNMFPQNIVEA 150
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Frame = -3
Query: 197 RTRLTIELQWHFRLPSFVLILETKRPYHIQP 105
+ R+T++++ ++ + VL+ +T+RP+H +P
Sbjct: 257 KRRVTMDIRENYGMKRLVLLRQTRRPFHNEP 287
>U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical
protein AH9.1 protein.
Length = 411
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = -1
Query: 619 KTFLNKSNNVSEVRVSLVTI---FVVLSSSFPLELLPGLMVVTKAIPNMTAQTVV 464
K F N S R L+ + F+ L FP L VVT A+ N T T+V
Sbjct: 163 KFFQNNETKPSRRRTMLIIVMIYFIALMIYFPSVFQKKLGVVTDALTNKTIYTIV 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,250,370
Number of Sequences: 27780
Number of extensions: 333077
Number of successful extensions: 901
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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