Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_H23
(546 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and coile... 191 1e-48
AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune... 191 1e-48
AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein. 191 1e-48
AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and coile... 191 1e-48
AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein. 191 1e-48
AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein. 191 1e-48
AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein. 189 5e-48
AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein. 175 8e-44
>BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 191 bits (466), Expect = 1e-48
Identities = 92/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL GDD TDC FI
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFI 144
>AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune
protein protein.
Length = 188
Score = 191 bits (466), Expect = 1e-48
Identities = 92/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL GDD TDC FI
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFI 144
>AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein.
Length = 188
Score = 191 bits (466), Expect = 1e-48
Identities = 92/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL GDD TDC FI
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFI 144
>AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 191 bits (466), Expect = 1e-48
Identities = 92/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL GDD TDC FI
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFI 144
>AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 191 bits (466), Expect = 1e-48
Identities = 92/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 46 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 105
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 106 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 165
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL GDD TDC FI
Sbjct: 166 YIQGLSHRNLLGDDTTDCSFI 186
>AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein.
Length = 188
Score = 191 bits (466), Expect = 1e-48
Identities = 92/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL GDD TDC FI
Sbjct: 124 YIQGLSHRNLLGDDTTDCSFI 144
>AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein.
Length = 149
Score = 189 bits (461), Expect = 5e-48
Identities = 91/141 (64%), Positives = 107/141 (75%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
DLS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 QQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 123
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGL HRNL GDD TDC FI
Sbjct: 124 YIQGLPHRNLLGDDTTDCSFI 144
>AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein.
Length = 130
Score = 175 bits (426), Expect = 8e-44
Identities = 90/141 (63%), Positives = 106/141 (75%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
LS+V+MKSMFAIGF FTAL+ MFNSIFDGRVVAKLPF P+S
Sbjct: 64 -------------------LSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFTPLS 104
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGL HRNL GDD TDC FI
Sbjct: 105 YIQGLPHRNLLGDDTTDCSFI 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,129,997
Number of Sequences: 237096
Number of extensions: 975568
Number of successful extensions: 5833
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5826
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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