Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_H23
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-9|CAA90361.1| 186|Caenorhabditis elegans Hypothetical pr... 167 3e-42
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 28 3.8
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 28 3.8
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 28 3.8
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 8.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 8.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL110485-31|CAB60352.2| 280|Caenorhabditis elegans Hypothetical... 27 8.8
AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine re... 27 8.8
>Z50044-9|CAA90361.1| 186|Caenorhabditis elegans Hypothetical
protein F22B5.10 protein.
Length = 186
Score = 167 bits (407), Expect = 3e-42
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = +3
Query: 123 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 302
M D LLI+ I+ TA GEG+TW+LVYR++ Y++LK ++++++KKLEK+K+ GD+ D
Sbjct: 1 MLGDCLLIIAIAFGTALAGEGITWLLVYRSDHYKRLKADMDKKTKKLEKKKQEVGDTNDK 60
Query: 303 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPIS 482
D+S+ KMKSMFAIG AFTALLS FNSIF+GRVVAKLPFYPI
Sbjct: 61 NIKRKLEREEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFEGRVVAKLPFYPIG 120
Query: 483 WIQGLSHRNLPGDDYTDCXFI 545
+IQGLSHRNL G+D TDC FI
Sbjct: 121 FIQGLSHRNLIGEDMTDCSFI 141
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 201 VYRTEKYQKLKVEVERQSKKLEKR-KEAH 284
+YRTE ++K+K ER + EKR KE H
Sbjct: 850 IYRTELWEKMKPVYERLKRDKEKREKEWH 878
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 201 VYRTEKYQKLKVEVERQSKKLEKR-KEAH 284
+YRTE ++K+K ER + EKR KE H
Sbjct: 850 IYRTELWEKMKPVYERLKRDKEKREKEWH 878
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 222 QKLKVEVERQSKKLEKRKEAHGDSLD 299
QK+ +E E+QS+ ++ ++E GD++D
Sbjct: 123 QKIMMEFEKQSEIMDMKEEVMGDAID 148
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 833 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 860
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 1124 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 1151
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 1139 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 1166
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 1139 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 1166
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 833 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 860
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 1124 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 1151
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 1139 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 1166
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 216 KYQKLKVEVERQSKKLEKRKEAHGDSLD 299
K +K KV + + +KL+K+K GDS D
Sbjct: 1139 KKEKEKVRKKAEKEKLKKKKHRKGDSSD 1166
>AL110485-31|CAB60352.2| 280|Caenorhabditis elegans Hypothetical
protein Y46G5A.7 protein.
Length = 280
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 53 QNIRNNKFKFILSVSFIRLTILQNVERFSLNSFHLYLHC 169
+NI N F+ + RLT+ + L+ L +HC
Sbjct: 144 KNISNKLFRGLFKSKATRLTVRRTAHNIQLHDIDLMVHC 182
>AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein68 protein.
Length = 299
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 132 DSLLIVFISICTAFLGEGLTWVLVYRTEKYQKL 230
DS IVF I LG L W + Y K Q L
Sbjct: 2 DSYQIVFALIPITLLGSVLNWSIFYSIHKLQSL 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,704,154
Number of Sequences: 27780
Number of extensions: 155775
Number of successful extensions: 499
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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