Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H21
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.9  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   1.9  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 481 YIQSILFCSKYLIILVHILN*LWQHNFVA*YCFLL 377
           Y   +LFC  ++I  +H+L  L  + F   YC L+
Sbjct: 262 YYMHLLFCCAFIIFTMHLLFLLCIYYF---YCALI 293


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 296 VGVNATSPLTTCELKFVPETPAS 228
           + VN ++P+TTC  K   E+P++
Sbjct: 233 IEVNHSAPITTCNKKQHLESPSA 255


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 355 PMPSASTQAKSSIKLQNCVATVSLGCELKLLDIYCRTRYSEY--NPARF 495
           P+P  + Q    +KL +   TV  GC + ++  +   R  EY  NP +F
Sbjct: 61  PVPIIARQLNQDLKLASGDYTVPAGCTV-VIGTFKVHRLEEYYPNPDKF 108


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 259 SQVVNGDVALTPTNSSFTPQP-LNPHNSMTALTPMPSASTQAKSSIKLQNCVATVSL 426
           +++ NGD+AL       +P P L P    TA T   SAS  + S       V  +SL
Sbjct: 177 TRLANGDIALVLPTQGASPLPLLVPIPQRTAST-ASSASNYSPSQSPEPESVRPLSL 232


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 369 IHSSKKQYQATKLCCHSQFRM*TKIIRYLLQNK 467
           IH  + Q+    +    +F +   I+R L +NK
Sbjct: 465 IHQGETQFVVANIILRRRFALINSILRKLYKNK 497


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 391 YCFLLEWMH 365
           Y FLLEW H
Sbjct: 59  YTFLLEWYH 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,727
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)