Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_H21
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein |Sch... 59 6e-10
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 37 0.003
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 36 0.006
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 31 0.13
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 0.51
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.68
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 0.89
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 28 1.6
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 2.1
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 27 3.6
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 26 4.8
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 4.8
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 26 6.3
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 25 8.3
>SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 59.3 bits (137), Expect = 6e-10
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 397 LQNCVATVSLGCELKLLDIYCRTRYSEYNPARFQGVVMKILDPRATALVF 546
LQN VATV+L C L L I R +EYNP RF V+M+I +P++TAL+F
Sbjct: 58 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIF 107
Score = 33.1 bits (72), Expect = 0.042
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 385 SSIKLQNCVATVSLGCELKLLDI-YCRTRYSEYNPARFQGVVMKILDPRATALVF 546
+ K+QN V + + ++L + Y +S Y P F G++ +++ P+ L+F
Sbjct: 144 TDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMVKPKVVLLIF 198
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 36.7 bits (81), Expect = 0.003
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +1
Query: 109 TLNQMEVSQANRVEKAHEGSISEMYSTPKTPIKAQNFSKEDA-GVSGTNLSSQVVNGDVA 285
T N+ + SQ + + S +T +T AQ + E+ SG NL++ + ++
Sbjct: 249 TANKTDASQQSTESTSSSASAYSYITTLQTATTAQQTTSENTYSTSGPNLTTSNTSPQIS 308
Query: 286 LTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSI 393
T ++SSF + + S ++ T + +AST A ++I
Sbjct: 309 STISSSSFIVESPSVALSTSSTTTITNASTPAANTI 344
Score = 26.6 bits (56), Expect = 3.6
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Frame = +1
Query: 184 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 351
STP T N S S N S+ + + V TP SS P S+TAL
Sbjct: 2517 STPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNS 2576
Query: 352 -TPMPSASTQAKSSIKLQNCVATVS 423
TP+ S+S S+ + V S
Sbjct: 2577 STPITSSSVLNSSTPITSSTVVNTS 2601
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 256 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVA 414
SS VVN +T + + T P+ + + + TP+ S ST SS + + A
Sbjct: 3374 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-STVVNSSTPITSSTA 3425
Score = 26.6 bits (56), Expect = 3.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 184 STPKTPIKAQNFSKEDAGVSGTN-----LSSQVVNGDVALTPTNSSFTPQPLNPHNSMTA 348
STP T A N S S N SS VVN +T + + T P+ + +
Sbjct: 3381 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNS 3440
Query: 349 LTPMPSASTQAKSS 390
TP+ S+S S+
Sbjct: 3441 STPITSSSVLNSST 3454
Score = 25.8 bits (54), Expect = 6.3
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 184 STPKTPIKAQNFSKEDAGVSGTN-----LSSQVVNGDVALTPTNSSFTPQPLNPHNSMTA 348
STP T + A N S S N SS VVN +T + + P+ ++
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 349 LTPMPSASTQAKSS 390
TP+ S+S S+
Sbjct: 2625 STPITSSSVLNSST 2638
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 256 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 390
SS VVN +T + + T P+ + + TP+ S+S S+
Sbjct: 3026 SSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSST 3070
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 256 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVATVS 423
SS VVN +T + T P+ + + + TP+ S+S S+ + V S
Sbjct: 1514 SSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTS 1569
Score = 25.4 bits (53), Expect = 8.3
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = +1
Query: 184 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 351
STP T A N S S N S+ + + V TP SS P S T L
Sbjct: 2469 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNS 2528
Query: 352 -TPMPSASTQAKSSIKLQNCVATVS 423
TP+ S+S S+ + V S
Sbjct: 2529 STPITSSSVLNSSTPITSSTVVNTS 2553
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 35.9 bits (79), Expect = 0.006
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 184 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMP 363
STP T I N S S +SS +++ + T T++ + P N+ + +P
Sbjct: 538 STPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIP 597
Query: 364 SASTQAKSSI 393
S+ST SS+
Sbjct: 598 SSSTDYSSSL 607
Score = 28.7 bits (61), Expect = 0.89
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 166 SISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMT 345
S ++ S + + +NF+ + +S TN S + + +NSS + L +S+
Sbjct: 504 SFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVS---LQTSSSLI 560
Query: 346 ALTPMPSASTQAKSS 390
+P+ S+S A S+
Sbjct: 561 ISSPIISSSLTATST 575
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 31.5 bits (68), Expect = 0.13
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 214 NFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSI 393
+F+ EDA S + +NG L +N+ F+ +P P N+++ + S+ + S +
Sbjct: 171 DFATEDALKLALQCSEKALNGRNILIKSNTDFSGRPSKPANTLSKTASIQSSKKEPSSIL 230
Query: 394 KLQN 405
+ N
Sbjct: 231 FVGN 234
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 29.5 bits (63), Expect = 0.51
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +1
Query: 109 TLNQMEVSQANRVEKAHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVAL 288
T E + N G S+ S+P+TP+ + SK+ N +S+ NG+
Sbjct: 497 TNKDSEKNDNNDASLQSAGVASDGESSPETPLTKASKSKKAKASKLANDTSKNANGETKS 556
Query: 289 TPTNS-SFTPQPLNPHNSMTA 348
TP S T + NS TA
Sbjct: 557 TPKKSKKKTSKAQQEANSTTA 577
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.68
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 187 TPKTPIKAQNFS-KEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQP-LNPHNSMTALTPM 360
T +P+ + S + T S+ V V T T+S+ TP P + ++ T+ +P+
Sbjct: 273 TNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPL 332
Query: 361 PSASTQAKSSIKL 399
PS ST +S +
Sbjct: 333 PSTSTSCTTSTSI 345
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 184 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTP--QPLNPHNSMTALTP 357
STP P + + + T+ S ++ PT +S TP + P ++ + TP
Sbjct: 314 STPPPPASTSSTGTSSSPLPSTSTSCTT---STSIPPTGNSTTPVTPTVPPTSTSSTSTP 370
Query: 358 MPSASTQA 381
P AST +
Sbjct: 371 PPPASTSS 378
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 28.7 bits (61), Expect = 0.89
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 190 PKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSS 306
P+TP+ F AG + +N+SS V +G+ N S
Sbjct: 951 PETPLDTAYFDSRGAGAAESNMSSSVNSGEEVSKDNNVS 989
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 RVEKAHEGS-ISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQV 267
R KA + +S+MY + + ++FSK D G+S NLS +
Sbjct: 262 RKNKAFSSAKVSDMYLSADERNRLEDFSKGDRGLSFVNLSPNI 304
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 232 AGVSGTNLSSQVVNGDV-ALTPTN-SSFTPQPLNPHNSMTALTPMPSASTQAKSSI 393
A V+ T+ SS ++T TN +S P P HNS T P P+ S +++
Sbjct: 42 ANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVP-PTTSMNTTTTV 96
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 235 GVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVA 414
G SGT + VNG ++ F + + HN TA++P P A+T + I+ + V
Sbjct: 272 GNSGTLFAP--VNGIWSMKDEPVEFLGK-VETHNHPTAVSPFPGAATGSGGEIRDEGAVG 328
Query: 415 TVSL 426
SL
Sbjct: 329 QGSL 332
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 337 SMTALTPMPSASTQAKSSIKLQNCVATVSLGCELKL--LDIYCRTRY 471
S L P P ST A S L N A SLG E+K +D++C Y
Sbjct: 203 SFAGLLPSPYLSTYAGSKAFLSNWSA--SLGEEVKKQGIDVWCFNSY 247
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 4.8
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 145 VEKAHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPL 324
V K + +Y +P++ + + + D N NG + S FT Q
Sbjct: 322 VSKPPSSATGPLYHSPQSSLTNSSVASADVQERTHN-----TNGASPIQDQISEFTDQHQ 376
Query: 325 NPHNSMTALTP--MPSASTQAKSSIK 396
NP N+ A T + +A TQ +S K
Sbjct: 377 NPSNNDAASTQSILKTAPTQLSASAK 402
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 211 QNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 390
++FS D + LSS V NG T ++S + HNS + + + S +K +
Sbjct: 568 RDFSSTDEMSTSAPLSSTVQNGFKGFTYIDASAMDEAFGYHNSNDSASSISSQDDYSKDN 627
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 119 KWKSLKQIGLKKHMKVLSVKCIQHQKHQ 202
K SL ++GLK H K+L CI+ K Q
Sbjct: 57 KKASLSKLGLKNHSKIL---CIRPHKQQ 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,452,001
Number of Sequences: 5004
Number of extensions: 45456
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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