Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_H20
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1587 + 38468956-38469090,38470599-38470742,38470819-384708... 46 3e-05
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 40 0.002
01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034... 38 0.006
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 38 0.008
09_06_0360 - 22510132-22510433,22510577-22510716,22510979-225110... 33 0.16
01_07_0130 + 41262652-41262798,41262958-41263056,41263155-412632... 33 0.21
02_05_0960 + 33097510-33097821,33098846-33099043,33099174-330994... 32 0.37
11_06_0618 + 25565780-25566064,25566855-25567046,25567144-255674... 31 0.65
10_08_0516 + 18478743-18478830,18478940-18479319,18479406-184796... 31 0.65
12_02_0727 - 22564183-22564815,22564906-22565073,22565264-225653... 31 0.86
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 31 0.86
07_03_1218 + 24955627-24955631,24955883-24955937,24956015-249561... 31 1.1
01_03_0009 + 11601394-11601666,11602486-11602683,11602809-116030... 31 1.1
01_06_0003 - 25495812-25495953,25496062-25496129,25496961-254970... 30 2.0
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 29 2.6
01_05_0331 - 21057957-21058205,21059213-21059791 29 2.6
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 29 2.6
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 29 3.5
01_05_0330 - 21053162-21053557,21053682-21054083 29 3.5
09_02_0423 + 9153088-9153181,9153281-9153378,9153532-9153708,915... 29 4.6
04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680 28 6.1
04_03_0643 + 18328807-18331969,18332560-18332627 28 6.1
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 28 6.1
>01_06_1587 +
38468956-38469090,38470599-38470742,38470819-38470845,
38470970-38471060,38471224-38471267,38471352-38471450,
38472233-38472331,38472545-38472646,38472758-38472823,
38472960-38473084,38473175-38473346,38473588-38473674
Length = 396
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = +3
Query: 297 LVIHGLMGSKKNFESXXXXXXXXXXXXXXX-VDLRNHGDSPHTSS---HTYLELAADISH 464
+++HG++GS+KN+ S VDLR HGDS HT A D+
Sbjct: 120 VLLHGILGSRKNWGSFAKRLAQEFPMWQFLLVDLRCHGDSASIKKRGPHTVASTALDVLK 179
Query: 465 LMKKVSVKRAKIVGHSMGGRTAMVLALTENPKVASLVVVDISP--VSTAGLLNDFFPELL 638
L+ ++ + +VGHS GG+ ++ + V+D +P V G D EL+
Sbjct: 180 LIVQLRLTPRVLVGHSFGGK-GFPVSFVSPYHTFMVWVLDATPGKVRAGGDGEDHPAELI 238
Query: 639 KVMETMEFQ 665
+ + M Q
Sbjct: 239 ESLRRMPMQ 247
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Frame = +3
Query: 294 ILVIHGLMGSKKNFESXXXXXXXXXXXXXXXVDLRNHGDSP---------HTSSHTYLEL 446
IL +HG +G+ +++ VDL HG+S + S + +
Sbjct: 1483 ILFLHGFLGTSEDW--VPMMKALSPSARVIAVDLPGHGESEILQHDVENSNQISFSVQSV 1540
Query: 447 AADISHLMKKVSVKRAKIVGHSMGGRTAMVLALTENPKVASLVVVDISP 593
A + L++ ++ +VG+SMG R A+ +AL +N K++ V++ SP
Sbjct: 1541 ADLLLKLIRNITDGAVVVVGYSMGARIALHMALNQNHKISGAVIISGSP 1589
>01_06_1428 -
37301697-37302175,37302300-37302471,37302570-37303403,
37303847-37304012,37304334-37304573,37304765-37304905,
37305623-37305735,37306549-37306614,37307242-37307480,
37307615-37307897
Length = 910
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Frame = +3
Query: 237 TVDLAY-KIHGKPLSKNSVPILVIHGLMGSKKNFE-------SXXXXXXXXXXXXXXXVD 392
T LA+ +I P ++ V+HGL+GS +N+ S VD
Sbjct: 43 TETLAFDEIQLSPEKPSTATAFVLHGLLGSGRNWRSFSRALASELRDRSPSDEWRMVLVD 102
Query: 393 LRNHGDSPHTSS----HTYLELAADISHLMK-KVSVKRAKIVGHSMGGRTAMVLA 542
LRNHG S H A D++ L+K + +VGHSMGG+ A+ A
Sbjct: 103 LRNHGRSAGIKGLRPPHDMSTAARDLADLVKARGWAWPDVVVGHSMGGKVALDFA 157
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 414 PHTSSHTYLELAADISHLMKKVSVKRAKIVGHSMGGRTAMVLALTENPKVASLVVVDIS 590
PH S ++ + +A D LM + K+A + GHSMG + LA ++ SL +++++
Sbjct: 96 PHKSYYSTVIMARDALALMDHLGWKKAHVFGHSMGAMISCKLAAMAPHRICSLALLNVT 154
>09_06_0360 -
22510132-22510433,22510577-22510716,22510979-22511049,
22511152-22511352,22511541-22511786,22512148-22512209,
22512314-22512620
Length = 442
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 426 SHTYLELAADISHLMKKVSVKRAKIVGHSMGGRTAMVLAL 545
+HT +L D+ L K K ++VGHS+GG +A +LA+
Sbjct: 188 THTVYDLVTDLIALSDKKDYK-LRLVGHSLGGASAALLAI 226
>01_07_0130 +
41262652-41262798,41262958-41263056,41263155-41263220,
41264073-41264255
Length = 164
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 441 ELAADISHLMKKVSVKRAKIVGHSMGGRTAMVLALTENPKVASLVVVDISPV 596
EL +S ++++ RA I GHSMGG A+ + L K S V SPV
Sbjct: 8 ELPKVLSDNFEQLNTSRASIFGHSMGGHGALTIYLKNTDKYKS--VSAFSPV 57
>02_05_0960 +
33097510-33097821,33098846-33099043,33099174-33099446,
33099575-33099677,33100297-33100415,33100968-33101759
Length = 598
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 489 RAKIVGHSMGGRTAMVL--ALTENPKVASLVVVDISPVS 599
+ KIVGHS+GG TA +L L E + AS V +P +
Sbjct: 259 KIKIVGHSLGGGTAALLTYVLREQQEFASTTCVSFAPAA 297
>11_06_0618 +
25565780-25566064,25566855-25567046,25567144-25567416,
25567636-25567738,25568273-25568391,25568615-25568782,
25568908-25569386,25569742-25569850,25569905-25570070,
25571405-25571433
Length = 640
Score = 31.5 bits (68), Expect = 0.65
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 456 ISHLMKKVSVKRAKIVGHSMGGRTAMVLA--LTENPKVASLVVVDISPVS 599
+S +++ R KI+GHSMG A +L L EN K++S + P +
Sbjct: 237 LSRAVEQFPDYRIKIIGHSMGAGIAAILTYMLRENKKLSSSSCIAFGPAA 286
>10_08_0516 +
18478743-18478830,18478940-18479319,18479406-18479641,
18480280-18480538
Length = 320
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +3
Query: 405 GDSPHTSSHTYLELAADISHLMKKVSVKRAKIVGHSMGGRTAMVLALTENPKVASLVVVD 584
G P T+ +L AD+ ++ ++V A +VG G A AL + + +
Sbjct: 74 GQPPEQEEATWDDLVADVLAILDALAVPGAFLVGKDFGAMPAYDFALRHPARTRGVACLG 133
Query: 585 ISPVSTAGLLNDFFPELLKVMETME 659
+ P S A D PE V+ E
Sbjct: 134 V-PFSPAPASFDAMPEGFYVLRWRE 157
>12_02_0727 -
22564183-22564815,22564906-22565073,22565264-22565382,
22565796-22565898,22566702-22566974,22567088-22567279,
22568289-22568615
Length = 604
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 495 KIVGHSMGGRTAMVLA--LTENPKVASLVVVDISPVS 599
KI+GHSMG A +LA L EN K++S + P +
Sbjct: 264 KIIGHSMGAGIAAILAYILRENEKLSSSTCLAFGPAA 300
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 31.1 bits (67), Expect = 0.86
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +3
Query: 387 VDLRNHGDSPHTS-SHTYLE-LAADISHLMKKV---SVKRAKIVGHSMGGRTAM-VLALT 548
+DLR HG S + S +E L++D+ +++ + S +VGHSMGG A+ V A
Sbjct: 106 MDLRGHGKSTTSDDSDLSIETLSSDVIAVLRTLYGDSPPAIILVGHSMGGSVAIHVAAKK 165
Query: 549 ENPKVASLVVVDI 587
+ LVV+D+
Sbjct: 166 VIRNLHGLVVIDV 178
>07_03_1218 +
24955627-24955631,24955883-24955937,24956015-24956131,
24957142-24957306,24957703-24957958,24957987-24958051
Length = 220
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +3
Query: 450 ADISHLMKKVSVKRAKIV--GHSMGGRTAMVLALTENPKVASLVVVD--ISPVSTAGLLN 617
A + HL+++ + ++IV G S+GG VLA KV++L++ + S + AG++
Sbjct: 21 AALDHLVQRKDIDTSRIVVFGRSLGGAVGAVLAKNNPGKVSALILENTFTSILDMAGIML 80
Query: 618 DF 623
F
Sbjct: 81 PF 82
>01_03_0009 +
11601394-11601666,11602486-11602683,11602809-11603081,
11603493-11603595,11603666-11603784,11604038-11604214,
11604443-11605192
Length = 630
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 495 KIVGHSMGGRTAMVLA--LTENPKVASLVVVDISPVS 599
++VGHS+GG TA +L L E+ +++S V +P S
Sbjct: 248 RVVGHSLGGGTAALLTYILREHQELSSTTCVAFAPAS 284
>01_06_0003 -
25495812-25495953,25496062-25496129,25496961-25497050,
25497201-25497611,25497721-25498023
Length = 337
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 390 DLRNHGDSPHTSSHTYLELAAD-ISHLMKKVSVKRAKIVGHSMGGRTAMVLALTENPKVA 566
DL G S S+ A+ ++ ++K+ V+R +VG S GG + +A + V
Sbjct: 115 DLLYFGGSTSPSTDRSPGFQAECLAAALRKLGVERCTVVGFSYGGMVSFKMAESHPDLVT 174
Query: 567 SLVV 578
SLVV
Sbjct: 175 SLVV 178
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 387 VDLRNHGDSPHT--SSHTYLELAADISH-LMKKVSVKRAKIVGHSMGGRTAMVLALTENP 557
VDL G SP S +T E I ++++ VK IV HS+G A+ LA+
Sbjct: 231 VDLLGFGRSPKPADSLYTLREHVEMIERSVIERHGVKSFHIVAHSLGSILALALAVKYPA 290
Query: 558 KVASLVVV 581
V SL +V
Sbjct: 291 AVRSLTLV 298
>01_05_0331 - 21057957-21058205,21059213-21059791
Length = 275
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 486 KRAKIVGHSMGGRTAMVLALTENPKVASLVVV 581
+RA +VGHS GG + + A T KVA+ V V
Sbjct: 81 ERAVLVGHSFGGMSVALAAETFPDKVAAAVFV 112
>01_05_0279 +
20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 643 TFRSSGKKSLSRPAVETGDMSTTTKLATFGFSVKA 539
T RSS SL RPAV D++ +ATF F+ A
Sbjct: 515 TLRSSSSPSLDRPAVAV-DLTAAAIVATFAFTSAA 548
>02_05_0481 +
29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -3
Query: 556 GFSVKASTIAVLPPILC-PTIFALFT 482
G +KA +A L P+LC P +F+LFT
Sbjct: 831 GVPLKADFLAALLPLLCIPAVFSLFT 856
>01_05_0330 - 21053162-21053557,21053682-21054083
Length = 265
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 486 KRAKIVGHSMGGRTAMVLALTENPKVASLVVV 581
+RA +VGHS GG + + A T KVA+ V V
Sbjct: 86 ERAVLVGHSFGGMSVALAADTLPDKVAAAVFV 117
>09_02_0423 +
9153088-9153181,9153281-9153378,9153532-9153708,
9153827-9153927,9154334-9154490
Length = 208
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 346 AILSKFFLEPIN--PCITSIGTLFLERGFPCILYAKSTVERLQKNIKDITFLFKSSFV 179
AI S+FF P+ P + +G ERGFP + K+ + L + D T F F+
Sbjct: 153 AICSRFF-SPLGMVPVVALVGLGLFERGFPVV---KALIATLTSTLYDSTSQFNVRFL 206
>04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680
Length = 936
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 510 SMGGRTAMVLALTENPKVASLVVVDISPVSTAGLLNDFFPELLKV 644
S G + +M+L T + KVA+L V + P GL ND F + K+
Sbjct: 351 SNGLQGSMILVTTRSSKVANL-VSNSDPYELNGLQNDVFWDFFKL 394
>04_03_0643 + 18328807-18331969,18332560-18332627
Length = 1076
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 510 SMGGRTAMVLALTENPKVASLVVVDISPVSTAGLLNDFFPELLKV 644
S G + +M+L T + KVA+L V + P GL ND F + K+
Sbjct: 351 SNGLQGSMILVTTRSSKVANL-VSNSDPYELNGLQNDVFWDFFKL 394
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 290 SYTGDTRVNGLQKELREYRQKHSSHHEEYRHHCRFTKSRRQSSHELTYVPRI 445
SY T V+ + K+ ++YR+ S + H R TKS L Y I
Sbjct: 566 SYNKQTDVHSMPKKSQKYREMKSKEGIQNLEHKRSTKSEATQLKILPYTAEI 617
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,087,105
Number of Sequences: 37544
Number of extensions: 391143
Number of successful extensions: 1098
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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