Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H19
         (452 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro...    31   0.72 
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA...    31   0.72 
AY118749-1|AAM50609.1|  360|Drosophila melanogaster GH07049p pro...    30   1.3  
AE014296-1855|AAF50129.2|  360|Drosophila melanogaster CG6409-PA...    30   1.3  

>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
           protein.
          Length = 1071

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 29  VTCLCGVAPELNQCHFVPGRXQSHCVSRGSASVGRH 136
           + C CG+   L QC  +P    +HC   G+ S  RH
Sbjct: 653 IVCSCGLQGRLEQCQPLPSYMHAHCTLPGARSY-RH 687


>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
           protein.
          Length = 1071

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 29  VTCLCGVAPELNQCHFVPGRXQSHCVSRGSASVGRH 136
           + C CG+   L QC  +P    +HC   G+ S  RH
Sbjct: 653 IVCSCGLQGRLEQCQPLPSYMHAHCTLPGARSY-RH 687


>AY118749-1|AAM50609.1|  360|Drosophila melanogaster GH07049p
           protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -1

Query: 164 QQPRPSGDQDGGRRMQTHAKRNGTXSDLAQNGTGLVPERHHTNTSPQKHD 15
           Q+P P+G QD  R+ + H +          +G   VP++     +P+ HD
Sbjct: 90  QKPSPAGPQDHKRKREAHHEEG-------HHGDDAVPQKEEVKQAPEDHD 132


>AE014296-1855|AAF50129.2|  360|Drosophila melanogaster CG6409-PA
           protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -1

Query: 164 QQPRPSGDQDGGRRMQTHAKRNGTXSDLAQNGTGLVPERHHTNTSPQKHD 15
           Q+P P+G QD  R+ + H +          +G   VP++     +P+ HD
Sbjct: 90  QKPSPAGPQDHKRKREAHHEEG-------HHGDDAVPQKEEVKQAPEDHD 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,840,975
Number of Sequences: 53049
Number of extensions: 308063
Number of successful extensions: 847
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)