Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H18
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0672 + 20593277-20594026                                         29   2.6  
11_03_0068 + 9564354-9565180,9566658-9568704                           28   5.9  

>07_03_0672 + 20593277-20594026
          Length = 249

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 472 TFMKS-NFKCNQIYNIETTHIYSVNQSYDMIKVYYITFSYQKLVEISN 612
           TFM++ N KC+++ NI+ +H  ++   Y  +KV   T    K   ++N
Sbjct: 20  TFMQNRNIKCSRLQNIQQSHPKAIMDLYLDLKVMVNTLPESKRSHLAN 67


>11_03_0068 + 9564354-9565180,9566658-9568704
          Length = 957

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 101 KNHICNSVNNFIPSIINLNKISRNTFFLYLPYLKNCSLIL 220
           +N +C++  N +PS+ N+ +I   ++     YLK C L L
Sbjct: 396 RNSVCSATEN-VPSVSNMQRILSLSYNDLPHYLKTCLLYL 434


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,648,146
Number of Sequences: 37544
Number of extensions: 179772
Number of successful extensions: 242
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)