Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H18
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astaci...    29   4.0  
Z81047-8|CAB02830.2|  323|Caenorhabditis elegans Hypothetical pr...    28   5.3  

>U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astacin
           protease protein39 protein.
          Length = 951

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 355 MNFTNFNVESMKVK*GCHLYKITNSER 435
           +NFT FNVE MK +      KI +SE+
Sbjct: 582 LNFTKFNVEGMKTECAYDYVKIGDSEK 608


>Z81047-8|CAB02830.2|  323|Caenorhabditis elegans Hypothetical
           protein C41G6.10 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 294 LNALILFTYLFFFHNNKVSLYEFY 365
           LN L++  YL  FHN K+  ++FY
Sbjct: 27  LNGLVI--YLLIFHNGKIGSFKFY 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,160,434
Number of Sequences: 27780
Number of extensions: 226084
Number of successful extensions: 565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)