Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H15
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 167  TGLFLTIYYTANIEIAFYRVNYICRNVNY 253
            TG    +YY    E+ FY  N+   ++NY
Sbjct: 1600 TGHVAPLYYHPEDEVVFYNANF---SINY 1625



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 50   HPIFKIINNSLIDLPS 97
            HP+ K +NN L   PS
Sbjct: 2677 HPLLKTLNNELRGTPS 2692


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 2   GRPIRMIIFFKSIRKTHPIFKIINNS 79
           G PI MII + S+   + I ++ NN+
Sbjct: 213 GWPIIMIILYSSLMVLNYIDEVFNNN 238


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 481 CNPLFRNYISKLNLRGIC 534
           CNP++  Y  K    G+C
Sbjct: 566 CNPIYDAYCQKHYANGLC 583


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,370
Number of Sequences: 336
Number of extensions: 2778
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)