Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H14
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC121147-1|AAI21148.1|  456|Homo sapiens translocase of inner mi...    75   3e-13
BC050082-1|AAH50082.1|  359|Homo sapiens TIMM50 protein protein.       75   3e-13
BC010736-1|AAH10736.1|  351|Homo sapiens TIMM50 protein protein.       75   3e-13
BC009072-1|AAH09072.1|  344|Homo sapiens TIMM50 protein protein.       75   3e-13
AY551341-1|AAT01208.1|  353|Homo sapiens translocase of inner mi...    75   3e-13
BC121146-1|AAI21147.1|  240|Homo sapiens TIMM50 protein protein.       53   9e-07
AY444561-1|AAS68537.1|  240|Homo sapiens TIM50L protein.               53   9e-07

>BC121147-1|AAI21148.1|  456|Homo sapiens translocase of inner
           mitochondrial membrane 50 homolog (S. cerevisiae)
           protein.
          Length = 456

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +3

Query: 366 VFGGGLTVAATCLVIEMGSPRRDDEGQIIEDEFSHLPIVFQYLRRSWKELTFYEKMIKEP 545
           + G G TV+   +V   G+   D+ G  I DEF + PI+ Q LRR++K    Y +MI EP
Sbjct: 176 LLGAGGTVS---VVYIFGNNPVDENGAKIPDEFDNDPILVQQLRRTYKYFKDYRQMIIEP 232

Query: 546 SREKXXXXXXXXXXXXX-XXXXXEFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           +                      E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 233 TSPCLLPDPLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 288


>BC050082-1|AAH50082.1|  359|Homo sapiens TIMM50 protein protein.
          Length = 359

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +3

Query: 366 VFGGGLTVAATCLVIEMGSPRRDDEGQIIEDEFSHLPIVFQYLRRSWKELTFYEKMIKEP 545
           + G G TV+   +V   G+   D+ G  I DEF + PI+ Q LRR++K    Y +MI EP
Sbjct: 79  LLGAGGTVS---VVYIFGNNPVDENGAKIPDEFDNDPILVQQLRRTYKYFKDYRQMIIEP 135

Query: 546 SREKXXXXXXXXXXXXX-XXXXXEFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           +                      E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 136 TSPCLLPDPLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 191


>BC010736-1|AAH10736.1|  351|Homo sapiens TIMM50 protein protein.
          Length = 351

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +3

Query: 366 VFGGGLTVAATCLVIEMGSPRRDDEGQIIEDEFSHLPIVFQYLRRSWKELTFYEKMIKEP 545
           + G G TV+   +V   G+   D+ G  I DEF + PI+ Q LRR++K    Y +MI EP
Sbjct: 71  LLGAGGTVS---VVYIFGNNPVDENGAKIPDEFDNDPILVQQLRRTYKYFKDYRQMIIEP 127

Query: 546 SREKXXXXXXXXXXXXX-XXXXXEFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           +                      E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 128 TSPCLLPDPLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 183


>BC009072-1|AAH09072.1|  344|Homo sapiens TIMM50 protein protein.
          Length = 344

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +3

Query: 366 VFGGGLTVAATCLVIEMGSPRRDDEGQIIEDEFSHLPIVFQYLRRSWKELTFYEKMIKEP 545
           + G G TV+   +V   G+   D+ G  I DEF + PI+ Q LRR++K    Y +MI EP
Sbjct: 64  LLGAGGTVS---VVYIFGNNPVDENGAKIPDEFDNDPILVQQLRRTYKYFKDYRQMIIEP 120

Query: 546 SREKXXXXXXXXXXXXX-XXXXXEFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           +                      E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 121 TSPCLLPDPLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 176


>AY551341-1|AAT01208.1|  353|Homo sapiens translocase of inner
           mitochondrial membrane 50-like protein protein.
          Length = 353

 Score = 74.5 bits (175), Expect = 3e-13
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = +3

Query: 366 VFGGGLTVAATCLVIEMGSPRRDDEGQIIEDEFSHLPIVFQYLRRSWKELTFYEKMIKEP 545
           + G G TV+   +V   G+   D+ G  I DEF + PI+ Q LRR++K    Y +MI EP
Sbjct: 73  LLGAGGTVS---VVYIFGNNPVDENGAKIPDEFDNDPILVQQLRRTYKYFKDYRQMIIEP 129

Query: 546 SREKXXXXXXXXXXXXX-XXXXXEFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           +                      E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 130 TSPCLLPDPLQEPYYQPPYTLVLELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 185


>BC121146-1|AAI21147.1|  240|Homo sapiens TIMM50 protein protein.
          Length = 240

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 612 EFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 40  ELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 72


>AY444561-1|AAS68537.1|  240|Homo sapiens TIM50L protein.
          Length = 240

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 612 EFTDVLVHPDWSYQTGWRFKKRPGVDQFLQAVA 710
           E T VL+HP+WS  TGWRFKKRPG++   Q +A
Sbjct: 40  ELTGVLLHPEWSLATGWRFKKRPGIETLFQQLA 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,304,348
Number of Sequences: 237096
Number of extensions: 1748059
Number of successful extensions: 3675
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3664
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)