Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H14
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-12|CAA97339.1|  452|Caenorhabditis elegans Hypothetical p...    66   3e-11
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    29   2.5  
AF022975-1|AAB70675.3|  587|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z73098-12|CAA97339.1|  452|Caenorhabditis elegans Hypothetical
           protein T21C9.12 protein.
          Length = 452

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = +3

Query: 342 RRMKLGFAVFGGGLTVAATCLVIEMGSPRRDDEGQIIEDEFSHLPIV-FQYLRRSWKELT 518
           R  ++G  V  GG  +         G  +RD+ G +I DEFS   +  F  +  S+K   
Sbjct: 164 RNTRIGAYVLFGGSIIGFISFCFYYGRAQRDEFGNVISDEFSGSFLAPFYRIANSFK--- 220

Query: 519 FYEKMIKEPSREKXXXXXXXXXXXXXXXXXX-EFTDVLVHPDWSYQTGWRFKKRPGVDQF 695
            +   + EP+RE+                   E  ++LVHP+W+Y+TG+RF KRP +D F
Sbjct: 221 LWRDYVVEPAREQLLPDPLPAPYLQPKYTIVIELKNILVHPEWTYKTGYRFLKRPALDYF 280

Query: 696 LQAV 707
           L  +
Sbjct: 281 LDVI 284


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
           protein F15D3.1a protein.
          Length = 3674

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
 Frame = +3

Query: 24  FFYYIEMYFRKLLFLTKTACCKSL-KLETKCHSXQNIW-IIAANSPKFYSNQNLDDRSKD 197
           F Y I  Y RKL+ LTKTA   ++ ++E      +  W +    +PK   +  LD  S  
Sbjct: 164 FNYLIHSYDRKLINLTKTAEMSAIDRIENAFAVAEKTWNVPRLLNPKDLHSDQLDSHSVL 223

Query: 198 DKPEKVDILGRFFPQAPQTQVDAQQIKKEQ 287
                +  L        +T+++AQQI++++
Sbjct: 224 CYLMSL-YLAMISTSKIETELEAQQIQQQK 252


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
           protein F15D3.1a protein.
          Length = 3674

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
 Frame = +3

Query: 24  FFYYIEMYFRKLLFLTKTACCKSL-KLETKCHSXQNIW-IIAANSPKFYSNQNLDDRSKD 197
           F Y I  Y RKL+ LTKTA   ++ ++E      +  W +    +PK   +  LD  S  
Sbjct: 164 FNYLIHSYDRKLINLTKTAEMSAIDRIENAFAVAEKTWNVPRLLNPKDLHSDQLDSHSVL 223

Query: 198 DKPEKVDILGRFFPQAPQTQVDAQQIKKEQ 287
                +  L        +T+++AQQI++++
Sbjct: 224 CYLMSL-YLAMISTSKIETELEAQQIQQQK 252


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
           protein.
          Length = 3674

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
 Frame = +3

Query: 24  FFYYIEMYFRKLLFLTKTACCKSL-KLETKCHSXQNIW-IIAANSPKFYSNQNLDDRSKD 197
           F Y I  Y RKL+ LTKTA   ++ ++E      +  W +    +PK   +  LD  S  
Sbjct: 164 FNYLIHSYDRKLINLTKTAEMSAIDRIENAFAVAEKTWNVPRLLNPKDLHSDQLDSHSVL 223

Query: 198 DKPEKVDILGRFFPQAPQTQVDAQQIKKEQ 287
                +  L        +T+++AQQI++++
Sbjct: 224 CYLMSL-YLAMISTSKIETELEAQQIQQQK 252


>AF022975-1|AAB70675.3|  587|Caenorhabditis elegans Hypothetical
           protein K09C6.7 protein.
          Length = 587

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 249 VGLAGRTSLRYLLFQVYHLYFYHLNF 172
           +G  GR   RYL    YH   YH +F
Sbjct: 265 IGNMGRVVCRYLALNQYHQTIYHFHF 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,370,971
Number of Sequences: 27780
Number of extensions: 269365
Number of successful extensions: 719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)