Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H04
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089234-1|AAL89972.1|  355|Drosophila melanogaster AT02512p pro...   343   2e-94
AL009192-1|CAA15687.1|  326|Drosophila melanogaster EG:133E12.3 ...   343   2e-94
AE014298-307|AAF45703.2|  355|Drosophila melanogaster CG4406-PA ...   343   2e-94
AY118835-1|AAM50695.1|  365|Drosophila melanogaster GM02889p pro...    32   0.91 
AE014297-2748|AAF55732.2|  386|Drosophila melanogaster CG4433-PA...    32   0.91 
AE014297-2747|AAS65179.1|  365|Drosophila melanogaster CG4433-PB...    32   0.91 

>AY089234-1|AAL89972.1|  355|Drosophila melanogaster AT02512p
           protein.
          Length = 355

 Score =  343 bits (842), Expect = 2e-94
 Identities = 155/199 (77%), Positives = 178/199 (89%), Gaps = 4/199 (2%)
 Frame = +2

Query: 143 IPEEF----QKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISD 310
           +PE F    Q+S HTNNWAVLVD SRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMI+D
Sbjct: 30  LPEGFVDAAQRSTHTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIAD 89

Query: 311 DMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQ 490
           DMACN RNPRP  ++N+A++ INVYGDDVEVDYRGYEV+VENF+RLLTGR    T RSK+
Sbjct: 90  DMACNARNPRPGQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKK 149

Query: 491 LLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQA 670
           LL+D GSN+LIYLTGHGGDGFLKFQDSEE+TSQELAD ++QMW+KKRYNE+FF++DTCQA
Sbjct: 150 LLSDAGSNVLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMVDTCQA 209

Query: 671 SSMYEKFYSPNILXTASSL 727
           +S+YEKF SPN+L  ASSL
Sbjct: 210 ASLYEKFTSPNVLAVASSL 228


>AL009192-1|CAA15687.1|  326|Drosophila melanogaster EG:133E12.3
           protein.
          Length = 326

 Score =  343 bits (842), Expect = 2e-94
 Identities = 155/199 (77%), Positives = 178/199 (89%), Gaps = 4/199 (2%)
 Frame = +2

Query: 143 IPEEF----QKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISD 310
           +PE F    Q+S HTNNWAVLVD SRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMI+D
Sbjct: 30  LPEGFVDAAQRSTHTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIAD 89

Query: 311 DMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQ 490
           DMACN RNPRP  ++N+A++ INVYGDDVEVDYRGYEV+VENF+RLLTGR    T RSK+
Sbjct: 90  DMACNARNPRPGQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKK 149

Query: 491 LLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQA 670
           LL+D GSN+LIYLTGHGGDGFLKFQDSEE+TSQELAD ++QMW+KKRYNE+FF++DTCQA
Sbjct: 150 LLSDAGSNVLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMVDTCQA 209

Query: 671 SSMYEKFYSPNILXTASSL 727
           +S+YEKF SPN+L  ASSL
Sbjct: 210 ASLYEKFTSPNVLAVASSL 228


>AE014298-307|AAF45703.2|  355|Drosophila melanogaster CG4406-PA
           protein.
          Length = 355

 Score =  343 bits (842), Expect = 2e-94
 Identities = 155/199 (77%), Positives = 178/199 (89%), Gaps = 4/199 (2%)
 Frame = +2

Query: 143 IPEEF----QKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISD 310
           +PE F    Q+S HTNNWAVLVD SRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMI+D
Sbjct: 30  LPEGFVDAAQRSTHTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIAD 89

Query: 311 DMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQ 490
           DMACN RNPRP  ++N+A++ INVYGDDVEVDYRGYEV+VENF+RLLTGR    T RSK+
Sbjct: 90  DMACNARNPRPGQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKK 149

Query: 491 LLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQA 670
           LL+D GSN+LIYLTGHGGDGFLKFQDSEE+TSQELAD ++QMW+KKRYNE+FF++DTCQA
Sbjct: 150 LLSDAGSNVLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMVDTCQA 209

Query: 671 SSMYEKFYSPNILXTASSL 727
           +S+YEKF SPN+L  ASSL
Sbjct: 210 ASLYEKFTSPNVLAVASSL 228


>AY118835-1|AAM50695.1|  365|Drosophila melanogaster GM02889p
           protein.
          Length = 365

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 NYRHVANVL--SIYRSVKRLGIPDSQIILMISDDMACNP 328
           N+ H A V    ++RS  +LGIP+S I+LM + ++  +P
Sbjct: 180 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDP 218


>AE014297-2748|AAF55732.2|  386|Drosophila melanogaster CG4433-PA,
           isoform A protein.
          Length = 386

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 NYRHVANVL--SIYRSVKRLGIPDSQIILMISDDMACNP 328
           N+ H A V    ++RS  +LGIP+S I+LM + ++  +P
Sbjct: 201 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDP 239


>AE014297-2747|AAS65179.1|  365|Drosophila melanogaster CG4433-PB,
           isoform B protein.
          Length = 365

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 NYRHVANVL--SIYRSVKRLGIPDSQIILMISDDMACNP 328
           N+ H A V    ++RS  +LGIP+S I+LM + ++  +P
Sbjct: 180 NFEHKAKVRRQELWRSCSKLGIPESNIVLMNATNLPDDP 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,622,848
Number of Sequences: 53049
Number of extensions: 586047
Number of successful extensions: 1496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)