Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_H04
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-7|CAA92977.2|  319|Caenorhabditis elegans Hypothetical pr...   269   2e-72
Z77653-3|CAB01126.1|  462|Caenorhabditis elegans Hypothetical pr...   122   3e-28
Z75551-5|CAA99935.1|  462|Caenorhabditis elegans Hypothetical pr...   122   3e-28
AF067448-1|AAF21773.1|  187|Caenorhabditis elegans hemoglobinase...   116   1e-26

>Z68751-7|CAA92977.2|  319|Caenorhabditis elegans Hypothetical
           protein T05E11.6 protein.
          Length = 319

 Score =  269 bits (659), Expect = 2e-72
 Identities = 122/197 (61%), Positives = 159/197 (80%)
 Frame = +2

Query: 137 IEIPEEFQKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISDDM 316
           ++I E F    HTNNWAVLV TS+FWFNYRHV+NVL++Y S+KRLGIPDS II+M+++D+
Sbjct: 24  LKIDELFDTPGHTNNWAVLVCTSKFWFNYRHVSNVLALYHSIKRLGIPDSNIIMMLAEDV 83

Query: 317 ACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQLL 496
            CN RNPRP T++ +A    N+YG DVEVDYRG EV+VE+FIR+LTGR  P TPRSK+LL
Sbjct: 84  PCNSRNPRPGTVY-AARAGTNLYGSDVEVDYRGEEVTVESFIRVLTGRHHPATPRSKRLL 142

Query: 497 TDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASS 676
           TD  SN+LIYLTGHGGD F+KFQDSEE+T+ +LA A++ M++  RY+E+  I D+C+++S
Sbjct: 143 TDHQSNVLIYLTGHGGDSFMKFQDSEELTNVDLAYAIQTMFEDNRYHEMLVIADSCRSAS 202

Query: 677 MYEKFYSPNILXTASSL 727
           MYE   SPN+L  +SSL
Sbjct: 203 MYEWIDSPNVLSLSSSL 219


>Z77653-3|CAB01126.1|  462|Caenorhabditis elegans Hypothetical
           protein T28H10.3 protein.
          Length = 462

 Score =  122 bits (293), Expect = 3e-28
 Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
 Frame = +2

Query: 125 LSSGIEIPEEFQKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMI 304
           L++G +   ++Q       + VLV  S  W+NYRH A+V   Y +++  GIP+  II M+
Sbjct: 27  LAAGRQRKHKYQDEGEA--FVVLVAGSNGWYNYRHQADVAHAYHTLRNHGIPEENIITMM 84

Query: 305 SDDMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPP-DTPR 481
            DD+A NP NP    +FN  H + ++Y   +++DY+G  V+ ENF+ +L G     D   
Sbjct: 85  YDDVANNPLNPYKGKLFNRPHGK-DLY-KGLKIDYKGASVTPENFLNVLKGNASGIDGGN 142

Query: 482 SKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDT 661
            + L T++   + +Y T HG  G + F D   +T ++L D L  M + K+Y+++ F ++ 
Sbjct: 143 GRVLETNDNDRVFVYFTDHGAVGMISFPDG-ILTVKQLNDVLVWMHKNKKYSQLTFYLEA 201

Query: 662 CQASSMYEK 688
           C++ SM+E+
Sbjct: 202 CESGSMFEE 210


>Z75551-5|CAA99935.1|  462|Caenorhabditis elegans Hypothetical
           protein T28H10.3 protein.
          Length = 462

 Score =  122 bits (293), Expect = 3e-28
 Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
 Frame = +2

Query: 125 LSSGIEIPEEFQKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMI 304
           L++G +   ++Q       + VLV  S  W+NYRH A+V   Y +++  GIP+  II M+
Sbjct: 27  LAAGRQRKHKYQDEGEA--FVVLVAGSNGWYNYRHQADVAHAYHTLRNHGIPEENIITMM 84

Query: 305 SDDMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPP-DTPR 481
            DD+A NP NP    +FN  H + ++Y   +++DY+G  V+ ENF+ +L G     D   
Sbjct: 85  YDDVANNPLNPYKGKLFNRPHGK-DLY-KGLKIDYKGASVTPENFLNVLKGNASGIDGGN 142

Query: 482 SKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDT 661
            + L T++   + +Y T HG  G + F D   +T ++L D L  M + K+Y+++ F ++ 
Sbjct: 143 GRVLETNDNDRVFVYFTDHGAVGMISFPDG-ILTVKQLNDVLVWMHKNKKYSQLTFYLEA 201

Query: 662 CQASSMYEK 688
           C++ SM+E+
Sbjct: 202 CESGSMFEE 210


>AF067448-1|AAF21773.1|  187|Caenorhabditis elegans
           hemoglobinase-type cysteine proteinaseprotein.
          Length = 187

 Score =  116 bits (280), Expect = 1e-26
 Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 1/167 (0%)
 Frame = +2

Query: 191 LVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISDDMACNPRNPRPATIFNSAHE 370
           LV  S  W+NYRH A+V   Y +++  GIP+  II M+ DD+A NP NP    +FN  H 
Sbjct: 1   LVAGSNGWYNYRHQADVAHAYHTLRNHGIPEENIITMMYDDVANNPLNPYKGKLFNRPHG 60

Query: 371 QINVYGDDVEVDYRGYEVSVENFIRLLTGRVPP-DTPRSKQLLTDEGSNILIYLTGHGGD 547
           + ++Y   +++DY+G   + ENF+ +L G     D    + L T++   + +Y T HG  
Sbjct: 61  K-DLY-KGLKIDYKGASETPENFLNVLKGNASGIDGGNGRVLETNDNDRVFVYFTDHGAV 118

Query: 548 GFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEK 688
           G + F D   +T ++L D L  M + K+Y+++ F ++ C++ SM+E+
Sbjct: 119 GMISFPDG-ILTVKQLNDVLVWMHKNKKYSQLTFYLEACESGSMFEE 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,522,456
Number of Sequences: 27780
Number of extensions: 306980
Number of successful extensions: 825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)