Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_G23
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    29   0.20 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.83 
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    25   1.9  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    25   1.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +1

Query: 559 RRARMATRLSAPSRRLADHRKLTNRSSD---SKRQSTEXRKTLILRRTACPRSRLNPKSF 729
           + A  + R   PSRR  + R+ + RS     S R     R++   R T+ PRSR   K  
Sbjct: 241 KNAHASIRKIPPSRR--NPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPK 298

Query: 730 SGPRGRRP 753
             PR RRP
Sbjct: 299 RLPRRRRP 306


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 633 PVGKLAMICQASGRCR*SCCHPGTS 559
           PVG  ++ C A GRC+   C PG +
Sbjct: 401 PVGSRSLQCNAEGRCQ---CKPGVT 422


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -3

Query: 653 WRFESEDXXXXXXXXXXXLDGADSLVAIRARRRWIPDFLYLCTEEFV 513
           W+ E E             DG D+   I +    +P   Y+C E FV
Sbjct: 209 WQMEQEGAGSGHNHGGDDSDGDDTKYEIHSDDEELPFKCYVCRESFV 255


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = -3

Query: 653 WRFESEDXXXXXXXXXXXLDGADSLVAIRARRRWIPDFLYLCTEEFV 513
           W+ E E             DG D+   I +    +P   Y+C E FV
Sbjct: 209 WQMEQEGGGSGHNHGGDDSDGDDTKYEIHSDDEELPFKCYVCRESFV 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,038
Number of Sequences: 2352
Number of extensions: 14724
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)