Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_G12
(681 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 250 2e-65
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 224 1e-57
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 222 7e-57
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 191 1e-47
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 171 1e-41
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 153 3e-36
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 144 1e-33
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 136 4e-31
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 125 1e-27
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 123 4e-27
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 118 1e-25
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 104 2e-21
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 68 8e-21
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 99 5e-20
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 97 3e-19
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 80 6e-14
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 79 1e-13
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 71 3e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 71 3e-11
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 71 3e-11
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 65 1e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 65 2e-09
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 63 7e-09
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 60 4e-08
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 57 3e-07
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 57 3e-07
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 57 5e-07
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 56 6e-07
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 54 3e-06
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 54 4e-06
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 53 6e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 7e-06
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 50 7e-05
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.005
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 43 0.006
UniRef50_O59436 Cluster: Putative uncharacterized protein PH1760... 36 0.91
UniRef50_Q8TM93 Cluster: O-methyltransferase; n=3; Methanomicrob... 33 4.9
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 6.4
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 6.4
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 8.5
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 8.5
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 8.5
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 250 bits (612), Expect = 2e-65
Identities = 121/185 (65%), Positives = 131/185 (70%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RHCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 193
Query: 633 AALTA 647
A A
Sbjct: 194 IAAKA 198
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 224 bits (548), Expect = 1e-57
Identities = 104/180 (57%), Positives = 125/180 (69%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKG
Sbjct: 14 VLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G GKR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFK
Sbjct: 74 RHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKR+LME+IH+ KA+KAR K+L+DQ +++T ++E+E
Sbjct: 134 NKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 222 bits (542), Expect = 7e-57
Identities = 101/145 (69%), Positives = 116/145 (80%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKG
Sbjct: 6 VLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKG 65
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G GKR+GTANARMP+K W +KKIDRH+YHSLY+K KGNVFK
Sbjct: 66 RHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFK 125
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
NKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 NKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 191 bits (466), Expect = 1e-47
Identities = 89/145 (61%), Positives = 104/145 (71%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR+R RKN ARRKG
Sbjct: 14 VFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSRSRCRKNLIARRKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G GKR+GTA+ARMPQK LW A KID+HLYH LY + KGN FK
Sbjct: 74 RHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
NKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 134 NKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 171 bits (417), Expect = 1e-41
Identities = 78/145 (53%), Positives = 101/145 (69%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSRAR RK EA+ G
Sbjct: 34 ILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMG 93
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G G+R G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+
Sbjct: 94 RHNGVGRREGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFR 153
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
NKR L+E+IH+ K EK + + L++Q
Sbjct: 154 NKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 153 bits (372), Expect = 3e-36
Identities = 77/145 (53%), Positives = 97/145 (66%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+A KNT KG
Sbjct: 14 VLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQAHCEKNT---LKG 70
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH GK +GTAN +P++ W +KKID H+ HSLY++ K NVFK
Sbjct: 71 RHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRVKRNVFK 130
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
N+ +LME IH+ KA+KA K+L+DQ
Sbjct: 131 NQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 144 bits (350), Expect = 1e-33
Identities = 64/145 (44%), Positives = 93/145 (64%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR R+R E + G
Sbjct: 14 LLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G GKR+G+ N+R K +W + K++RHLY SLY+K+KGNVFK
Sbjct: 74 RHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
NK++L E+IH+ K E+ R + D+
Sbjct: 134 NKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 136 bits (330), Expect = 4e-31
Identities = 70/165 (42%), Positives = 91/165 (55%), Gaps = 20/165 (12%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV------------------ 218
++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 14 ILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTFPTLRGFHAARAYF 73
Query: 219 --AVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAK 392
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AK
Sbjct: 74 NFQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAK 133
Query: 393 KIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 527
KID+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 134 KIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 125 bits (301), Expect = 1e-27
Identities = 58/145 (40%), Positives = 90/145 (62%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR R RK EA++KG
Sbjct: 14 ILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSRGRCRKRLEAKKKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G GKR GTANARMPQK++W +I + + Y +AKG++FK
Sbjct: 74 RHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
++ + + I ++KA++ R K L++Q
Sbjct: 134 HRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 123 bits (297), Expect = 4e-27
Identities = 61/145 (42%), Positives = 84/145 (57%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V++CGK++V +P I +SR+ IR +I+ ++ K + SR R+R A+R G
Sbjct: 14 VLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSRGRIRARHAAKRLG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G GKRRGT ARMP K LW +KIDRHLY +LY KAKGN+FK
Sbjct: 74 RHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQ 527
NKRVL+E+I + E+ K ++
Sbjct: 134 NKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 118 bits (285), Expect = 1e-25
Identities = 53/138 (38%), Positives = 82/138 (59%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
+++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR R R E ++KG
Sbjct: 14 LLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RH G G R+G ARM +KELW KKIDR Y LY++AKG FK
Sbjct: 74 RHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFK 133
Query: 453 NKRVLMEYIHRKKAEKAR 506
+K L ++ K R
Sbjct: 134 SKHQLYMFLEEHNLLKKR 151
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 104 bits (249), Expect = 2e-21
Identities = 50/136 (36%), Positives = 75/136 (55%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
+++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV+K E R+KG
Sbjct: 16 ILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKG 75
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
R G G RRG A AR P KE W + KIDR +Y LY AKG F+
Sbjct: 76 RRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFR 135
Query: 453 NKRVLMEYIHRKKAEK 500
++ L Y+ + K
Sbjct: 136 SRSHLFLYMREHELLK 151
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 68.1 bits (159), Expect(2) = 8e-21
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 96 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 275
+RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K T ARR+G
Sbjct: 49 LRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA-----------TLARRRGW 97
Query: 276 HCGFGKRRGT 305
H G KR+GT
Sbjct: 98 HMGIRKRKGT 107
Score = 55.2 bits (127), Expect(2) = 8e-21
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 396 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 527
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 99 bits (238), Expect = 5e-20
Identities = 49/111 (44%), Positives = 68/111 (61%)
Frame = +3
Query: 195 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 374
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 375 XXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 527
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/132 (34%), Positives = 71/132 (53%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
+++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+ E ++KG
Sbjct: 13 ILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRARELHEKKKKG 72
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
R G G R+G AR K W K ID Y LY K KGN+FK
Sbjct: 73 RRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFK 132
Query: 453 NKRVLMEYIHRK 488
++ L+ Y+ +K
Sbjct: 133 SRSHLLLYLKQK 144
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/117 (29%), Positives = 62/117 (52%)
Frame = +3
Query: 105 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 284
G +VW+DP +++++++ ++++R++I +G++ +P SR+R RK + KGR G
Sbjct: 23 GVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSG 82
Query: 285 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 455
G R+G+ANAR P+K W I Y Y KAKG +++
Sbjct: 83 QGSRKGSANARNPRKSRWMRTIRAQRKELKGMREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/128 (32%), Positives = 62/128 (48%)
Frame = +3
Query: 96 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 275
M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K E KGR
Sbjct: 14 MKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGR 73
Query: 276 HCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 455
G G RGT AR P+K W T KID+ Y Y K F +
Sbjct: 74 RRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGSFVS 133
Query: 456 KRVLMEYI 479
+ L +I
Sbjct: 134 RAQLRNHI 141
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 70.9 bits (166), Expect = 3e-11
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 248
+++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 24 ILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/129 (27%), Positives = 59/129 (45%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+ R R E R G
Sbjct: 14 VLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSKGRARSRAEKRAYG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
G G R+G + R +K+ W + Y +Y KA G F+
Sbjct: 74 HRKGPGSRKGRSGGRKNEKDEWVSRIRAQRRRLRELRDDGPLTPTQYREVYNKASGGEFE 133
Query: 453 NKRVLMEYI 479
+ L YI
Sbjct: 134 DVARLEAYI 142
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +3
Query: 93 VMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARR 266
++ G+ ++W+ DP EI ++ ++R +IK G++ P ++ + RR
Sbjct: 13 ILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRR 72
Query: 267 KGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 446
KGR G G+R+G A AR+ KE W + IDR Y LYM AKG
Sbjct: 73 KGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGT 132
Query: 447 FKNKRVLMEYI 479
F++ L Y+
Sbjct: 133 FRDLASLKRYM 143
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 65.3 bits (152), Expect = 1e-09
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = -2
Query: 593 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*V 414
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 413 V*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATV 276
+ +P++L +V +Q + + L+L P L HT + T++LT V
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/129 (27%), Positives = 58/129 (44%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR R R+ G
Sbjct: 14 VLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAKESYG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
G G R+G A AR +K + + Y +Y A G F
Sbjct: 74 HKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMYNMANGGEFD 133
Query: 453 NKRVLMEYI 479
+ R L Y+
Sbjct: 134 SVRRLTNYV 142
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 62.9 bits (146), Expect = 7e-09
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +3
Query: 108 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGF 287
K ++ + + ++ +R ++R ++K+GL+ KP +SR R R E R+ GR G
Sbjct: 15 KSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGR 74
Query: 288 GKRRGTANAR-MPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRV 464
G RRGT AR KE+W ID+ + +LY AKG F++
Sbjct: 75 GSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAH 134
Query: 465 LMEYI 479
L Y+
Sbjct: 135 LRTYM 139
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 60.5 bits (140), Expect = 4e-08
Identities = 40/121 (33%), Positives = 62/121 (51%)
Frame = -2
Query: 503 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 324
G+ LL + +L E + L + V+ V+ V LL V E+ NP +P LL
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 323 WHTRIGSTSSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDL 144
+ +GST L A + L + VF+ G+D ++ LDD+ I D ++D+L GVG+ D
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDF 162
Query: 143 I 141
I
Sbjct: 163 I 163
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 57.2 bits (132), Expect = 3e-07
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
+++CG K+ ++P + + + N+R+ I + K ++IKK + S R + ++ G
Sbjct: 13 LLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSG 72
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH--LYHSLYM--KAKG 440
G G+R+GT NAR K LW K+ + L + ++ K KG
Sbjct: 73 LKRGIGRRKGTKNARKKYKILWIHKIRNQRKLLKMFRNKKQFLNYKILLNKVFFFSKIKG 132
Query: 441 NVFKNKRVLMEYI 479
N F + + L+E++
Sbjct: 133 NFFSSTKHLLEHM 145
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/136 (24%), Positives = 58/136 (42%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
++ G ++ + P + ++ ++R +I GL+ +P SR R R ++KG
Sbjct: 11 ILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRHIKKKKG 70
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
R G G R+G R ++E W K++ ++ LY KGN F+
Sbjct: 71 RRRGHGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPRVWRQLYRMVKGNYFR 127
Query: 453 NKRVLMEYIHRKKAEK 500
+ L YI+ K K
Sbjct: 128 DLDHLKTYINEHKLAK 143
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +3
Query: 105 GKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHSRARVRKNTEARR-KGRH 278
G ++ + + I ++ ++ +R IR +IKDG +++ K V + S R+++ + R K
Sbjct: 18 GINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-SGGRLKERRKKRSLKSEG 76
Query: 279 CGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
G R+G AR K++W K IDRH Y LY+K KG +K
Sbjct: 77 KKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/137 (25%), Positives = 63/137 (45%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V G +++ DP +++IA+ +R +IR +I + KPV+ SR R + + K
Sbjct: 15 VTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGRAQHKRRQKAK- 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
R G ++G AR+ +K+++ K I + +LY K GN +
Sbjct: 74 RGSKAGSKQGRMGARVGKKQVYVKKVRALRYLLAVFKDRKDITNPEFWALYKKVGGNTVR 133
Query: 453 NKRVLMEYIHRKKAEKA 503
NK L + KA+++
Sbjct: 134 NKAHLHLLVDEIKAKRS 150
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 54.0 bits (124), Expect = 3e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 216 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 395
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 396 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 500
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 53.6 bits (123), Expect = 4e-06
Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = -3
Query: 538 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 362
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 361 LRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWT 221
R L L +F GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 424 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 603
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 604 CCRPSLEKTKPR 639
R S + +PR
Sbjct: 61 SSRLSPRRKRPR 72
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 384 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 527
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 49.6 bits (113), Expect = 7e-05
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +3
Query: 105 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 284
G ++ D + + ++A+ +R+NIR +I + SR R + +A+R R
Sbjct: 19 GVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGRAQTK-KAQRNKRGTK 77
Query: 285 FGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNK-- 458
G ++G AR+ +KE++ K++ + +LY K GN +NK
Sbjct: 78 QGSKQGRKGARVGKKEIYVAKVRSLRRLLKIAKDRKELTNPEFWALYKKVGGNTVRNKAH 137
Query: 459 -RVLMEYIHRKK 491
R LME I K+
Sbjct: 138 LRQLMEEIVAKR 149
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 215 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTT 102
R DD+ I D L D+L+GVG+ D + I +QP L FTT
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTT 42
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 105 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 212
G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 16 GAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_O59436 Cluster: Putative uncharacterized protein PH1760;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1760 - Pyrococcus horikoshii
Length = 177
Score = 35.9 bits (79), Expect = 0.91
Identities = 30/137 (21%), Positives = 55/137 (40%)
Frame = -2
Query: 455 VLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATV 276
VL+ +L +VE + +P++ L L + S P L P LL H+ T ++ +V
Sbjct: 3 VLKLTSLSPYVEHSIRLPIDFLLLLELPKFSSKGPYRLNPKLLLTHSCRLLTFPTSRTSV 62
Query: 275 TTLSTCLCVFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTXH 96
+ + + + Y F + L+ ++ + I+ + I PH + T
Sbjct: 63 SPFLLLFMPYPSPISALPLYGFFPYDPFLNKPPNIFPRYRGSNFINLLRIDPHPILATLQ 122
Query: 95 NRGCKPXLQLEGTHPDT 45
P L +G H T
Sbjct: 123 ELSSYPPLHFQGIHTPT 139
>UniRef50_Q8TM93 Cluster: O-methyltransferase; n=3;
Methanomicrobia|Rep: O-methyltransferase -
Methanosarcina acetivorans
Length = 349
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 680 YLLFTT*CLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLY-FIAAGLSLVAKHLRP 504
YL T C L+ K GF +S+G +Q+L+ G T+ L L Y +A +A+ +R
Sbjct: 65 YLNVLTACGLVIKKNGFYQNSQGAEQYLVTGSPTYYGDLILLEYERMAMSPKEIAERVRN 124
Query: 503 G 501
G
Sbjct: 125 G 125
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 223 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 104
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 426 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 527
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 545 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 426
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 251 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 132
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 32.7 bits (71), Expect = 8.5
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -2
Query: 599 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 441
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,436,247
Number of Sequences: 1657284
Number of extensions: 13997951
Number of successful extensions: 38604
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 37212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38570
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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