Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_G12
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 248 5e-66
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 248 5e-66
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 248 5e-66
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 248 5e-66
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 245 4e-65
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 32 0.83
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 7.8
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 7.8
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 7.8
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 7.8
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 248 bits (607), Expect = 5e-66
Identities = 121/185 (65%), Positives = 131/185 (70%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 19 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 78
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RHCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFK
Sbjct: 79 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 138
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 139 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 198
Query: 633 AALTA 647
A A
Sbjct: 199 IAAKA 203
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 248 bits (607), Expect = 5e-66
Identities = 121/185 (65%), Positives = 131/185 (70%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 32 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 91
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RHCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFK
Sbjct: 92 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 151
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 152 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 211
Query: 633 AALTA 647
A A
Sbjct: 212 IAAKA 216
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 248 bits (607), Expect = 5e-66
Identities = 121/185 (65%), Positives = 131/185 (70%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RHCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 193
Query: 633 AALTA 647
A A
Sbjct: 194 IAAKA 198
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 248 bits (607), Expect = 5e-66
Identities = 121/185 (65%), Positives = 131/185 (70%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RHCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 193
Query: 633 AALTA 647
A A
Sbjct: 194 IAAKA 198
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 245 bits (600), Expect = 4e-65
Identities = 120/185 (64%), Positives = 130/185 (70%)
Frame = +3
Query: 93 VMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 272
V+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEARRK
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKD 73
Query: 273 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 452
RHCGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 453 NKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 632
NKRVLMEYIH+KKAEK R+KML+DQ L+ A+EDE
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 193
Query: 633 AALTA 647
A A
Sbjct: 194 IAAKA 198
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 31.9 bits (69), Expect = 0.83
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -3
Query: 475 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 302
YS++ +L L +YR FL +++ NF TLC C +S FCG A V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
dynein heavy chian protein.
Length = 4639
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 141 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 242
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
protein.
Length = 1312
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 141 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 242
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 141 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 242
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 141 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 242
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,867,638
Number of Sequences: 53049
Number of extensions: 680875
Number of successful extensions: 1930
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -