Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_G09
         (902 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   1.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   2.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   10.0 

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 707 PSVLDFQLSCSSESLGCLTGNCIRDGI 627
           P ++  +  C   SL C  GNCI  G+
Sbjct: 108 PLLITDEPLCPDGSLACGDGNCIERGL 134


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 674 SESL--GCLTGNCIRDGIELVFILSTDSL 594
           SESL  GCL  NC R G    F +S +++
Sbjct: 14  SESLVSGCLITNCPRGGKRSKFAISENAV 42


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 603 RFSSDHHRSNGTLSSITAPVGPSPIFFPSP 514
           R S  HH ++   ++ T P G     FPSP
Sbjct: 38  RTSYQHHFNSPAGNAHTGPTGTHDAGFPSP 67


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 889 FRIGTHIGTGSFSDPGPYLDQNPYWK 812
           F+IG   GTG+  DP        Y+K
Sbjct: 200 FKIGDADGTGNCEDPEDVPGCEDYYK 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.310    0.125    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,586
Number of Sequences: 336
Number of extensions: 3905
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)