Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_G09
         (902 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    26   1.8  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   9.6  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +1

Query: 463  QDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNIN 618
            QDE  +    Q      +  E  RRW D+    A  P  P +  R  + +IN
Sbjct: 847  QDEKVASGGVQSDIRKRQREETMRRWQDQWTTGAGQPGAPGLKTRRLIPDIN 898


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +2

Query: 449 RNLRNKMK--TIQIQTHKEDILVTGEGKNIGDGPTGA 553
           R LR+++K  ++  QT ++     G+G ++G  PTGA
Sbjct: 303 RGLRHEIKHSSLYQQTSRQHG-TGGQGSSVGGAPTGA 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.125    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,128
Number of Sequences: 2352
Number of extensions: 15949
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)