Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_G09
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117223-1|AAI17224.1| 907|Homo sapiens zinc finger protein 228... 35 0.46
BC101753-1|AAI01754.1| 907|Homo sapiens zinc finger protein 228... 35 0.46
AF198358-1|AAF12816.1| 913|Homo sapiens zinc finger protein ZNF... 35 0.46
AC084239-2|AAG23968.1| 913|Homo sapiens ZNF228 protein protein. 35 0.46
AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein. 32 2.5
AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein. 32 2.5
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 32 2.5
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 32 2.5
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.7
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.7
BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for IM... 31 5.7
BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for IM... 31 5.7
BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein. 31 5.7
AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-... 31 5.7
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 5.7
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.7
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 5.7
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.7
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 31 5.7
>BC117223-1|AAI17224.1| 907|Homo sapiens zinc finger protein 228
protein.
Length = 907
Score = 34.7 bits (76), Expect = 0.46
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = -3
Query: 825 THIGNGANHIRS--HKTWRRHWAW 760
THIGNG+N+I+S + +WR H +W
Sbjct: 154 THIGNGSNYIKSQGYPSWRAHHSW 177
>BC101753-1|AAI01754.1| 907|Homo sapiens zinc finger protein 228
protein.
Length = 907
Score = 34.7 bits (76), Expect = 0.46
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = -3
Query: 825 THIGNGANHIRS--HKTWRRHWAW 760
THIGNG+N+I+S + +WR H +W
Sbjct: 154 THIGNGSNYIKSQGYPSWRAHHSW 177
>AF198358-1|AAF12816.1| 913|Homo sapiens zinc finger protein ZNF228
protein.
Length = 913
Score = 34.7 bits (76), Expect = 0.46
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = -3
Query: 825 THIGNGANHIRS--HKTWRRHWAW 760
THIGNG+N+I+S + +WR H +W
Sbjct: 160 THIGNGSNYIKSQGYPSWRAHHSW 183
>AC084239-2|AAG23968.1| 913|Homo sapiens ZNF228 protein protein.
Length = 913
Score = 34.7 bits (76), Expect = 0.46
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = -3
Query: 825 THIGNGANHIRS--HKTWRRHWAW 760
THIGNG+N+I+S + +WR H +W
Sbjct: 160 THIGNGSNYIKSQGYPSWRAHHSW 183
>AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein.
Length = 614
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 585
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 563 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 607
>AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein.
Length = 583
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 585
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 532 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 576
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 585
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 1290 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 1334
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 585
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 1235 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 1279
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for
IMAGE:4122390) protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for
IMAGE:3538108) protein.
Length = 474
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-27
protein.
Length = 148
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 9 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 45
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 296 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 332
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 296 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 332
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 31.1 bits (67), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 448 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 558
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.310 0.125 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,466,455
Number of Sequences: 237096
Number of extensions: 2514106
Number of successful extensions: 4650
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4634
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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